BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0581 (738 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17 SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 28 1.6 SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 27 3.7 SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 26 4.9 SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 4.9 SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.4 SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 6.4 SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|ch... 26 6.4 SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 6.4 SPAP14E8.04 |oma1||metallopeptidase Oma1 |Schizosaccharomyces po... 26 6.4 SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 26 6.4 SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 8.5 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 31.1 bits (67), Expect = 0.17 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = +3 Query: 261 PIPSPHAPVKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVDGINLEDIKEFAKAFK 440 P+P+P AP L+P SV + + + + P + +S + NLED KA Sbjct: 1180 PVPAPAAPQTLNPPSVSTVQQSKP--IESNTHTPEVKATSESPSASSNLEDRAARIKAEA 1237 Query: 441 LRRL 452 RR+ Sbjct: 1238 QRRM 1241 >SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 882 Score = 27.9 bits (59), Expect = 1.6 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 463 SPRPSRRSLKAFANSLMSSKLIPSTTLLEDWLIVGWFGESANRSASS 323 S PS+ SL + S SS PSTT L +V F S ++ SS Sbjct: 572 SSNPSQASLTEESLSTRSSPTKPSTTSLRSQSLVNRFASSTLKAPSS 618 >SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr 2|||Manual Length = 819 Score = 26.6 bits (56), Expect = 3.7 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 201 TITTSHNASGAN*QRRQRTGPIPSPHAPVKLSPGSVKSPSHDDA-DLLADSPNQPT 365 T T S + + + I SPHA SP + K SH+ D+ A P +P+ Sbjct: 97 TFTLSVSPDSQSSSATHQNDYISSPHADFSFSPPASKIQSHEPLNDMAAVHPLRPS 152 >SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 related|Schizosaccharomyces pombe|chr 2|||Manual Length = 773 Score = 26.2 bits (55), Expect = 4.9 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 4/38 (10%) Frame = -3 Query: 565 TFWCYIQFLKSADRTLTICG--PSVTDRAW--PTWVCV 464 T + Y+Q ++A++T++ICG P ++ P WV V Sbjct: 484 TLYIYVQSFQNANQTVSICGSLPEPAEKLTKAPLWVNV 521 >SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1092 Score = 26.2 bits (55), Expect = 4.9 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 225 SGAN*QRRQRTGPIPSPHAPVKLSPGSVKSPSHDDADLLADSPNQPTISQ 374 +GA+ Q TG PSP + S +P++ + + + D + PT+ Q Sbjct: 282 TGASTIAPQPTGTSPSPPVEMNFPDTSDITPAYSEPEPIQDFWSDPTLDQ 331 >SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 534 Score = 25.8 bits (54), Expect = 6.4 Identities = 18/80 (22%), Positives = 43/80 (53%) Frame = +3 Query: 153 AAMNSINRLAASNGEITITTSHNASGAN*QRRQRTGPIPSPHAPVKLSPGSVKSPSHDDA 332 ++ +S +R A+S+ + +SH +S ++ + + P+ S + S +S SH + Sbjct: 385 SSSSSSSRPASSSSHSSSLSSHKSSSSS---KSSSAPVSSAFYH---NSTSSRSSSHSSS 438 Query: 333 DLLADSPNQPTISQSSSNVV 392 L+ ++P ++ SSS+++ Sbjct: 439 HSLSSLSSKPILTASSSSLL 458 >SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccharomyces pombe|chr 2|||Manual Length = 1102 Score = 25.8 bits (54), Expect = 6.4 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +2 Query: 353 KPANDQPVFQQRSRWDQLRR-HQGIREGLQTATTWSGTY 466 +P QP Q + Q R+ H GI++ + T + +GTY Sbjct: 185 QPQQPQPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNGTY 223 >SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|chr 2|||Manual Length = 333 Score = 25.8 bits (54), Expect = 6.4 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Frame = +3 Query: 480 GQALSVTEGPHIVKVRSADLRNWI*HQKVRRKSNRCFERWMKEAEEKVRIPVKNHLTDF- 656 G+ +S G I VR R +I H + +RC E +++A ++ I ++ LTD Sbjct: 224 GKKMSYCLGFGIDSVRDVSHR-YIRHPENGLPRDRCPESVLQQALHEINIEFRSRLTDSE 282 Query: 657 -IGIGAEQKAQTANIRSHFRP 716 + E K + + + RP Sbjct: 283 RKALEEEDKREKDELDGYMRP 303 >SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase Its3|Schizosaccharomyces pombe|chr 1|||Manual Length = 742 Score = 25.8 bits (54), Expect = 6.4 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +3 Query: 267 PSPHAPVKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVDGINLEDIK 419 P+ H+P S SV + + +L DSP + SSN L+++K Sbjct: 93 PTAHSPSSSSNDSVITATGVPDGILRDSPIVSALEPPSSNSSSSPQLQNLK 143 >SPAP14E8.04 |oma1||metallopeptidase Oma1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 337 Score = 25.8 bits (54), Expect = 6.4 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +3 Query: 474 QVGQALSVTEGPHIVKVRSADLRNWI*HQKVRRKSNRCF-ERW 599 Q+G+AL+ K R + W+ +V+R+++ C+ E W Sbjct: 284 QMGKALAFASTHPSSKKRIRKIEEWLPEAQVKRETSDCYHETW 326 >SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccharomyces pombe|chr 3|||Manual Length = 1284 Score = 25.8 bits (54), Expect = 6.4 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +3 Query: 504 GPHIVKVRSADLRNWI 551 GPH+V V S+ L NW+ Sbjct: 599 GPHLVVVPSSTLENWL 614 >SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 1201 Score = 25.4 bits (53), Expect = 8.5 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = +3 Query: 570 RKSNRCFERWMKEAEEKVRI 629 RK + C +W+ EAE ++R+ Sbjct: 442 RKGSDCLSKWVGEAERQLRL 461 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,891,598 Number of Sequences: 5004 Number of extensions: 58100 Number of successful extensions: 217 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 217 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 349251756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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