Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0581
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14420.1 68417.m02225 lesion inducing protein-related similar... 30 1.4
At4g10840.2 68417.m01764 kinesin light chain-related low similar... 30 1.4
At4g10840.1 68417.m01765 kinesin light chain-related low similar... 30 1.4
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 30 1.8
At1g05380.1 68414.m00546 PHD finger transcription factor, putative 29 3.2
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 29 3.2
At4g04920.1 68417.m00715 expressed protein 29 4.3
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 28 5.6
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 28 5.6
At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS cla... 28 5.6
At5g58140.4 68418.m07274 protein kinase family protein / non pho... 28 7.4
At5g58140.3 68418.m07277 protein kinase family protein / non pho... 28 7.4
At5g58140.2 68418.m07276 protein kinase family protein / non pho... 28 7.4
At5g58140.1 68418.m07275 protein kinase family protein / non pho... 28 7.4
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 28 7.4
At5g67180.1 68418.m08469 AP2 domain-containing transcription fac... 27 9.8
At5g15680.1 68418.m01834 expressed protein 27 9.8
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 27 9.8
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 27 9.8
>At4g14420.1 68417.m02225 lesion inducing protein-related similar to
ORF, able to induce HR-like lesions [Nicotiana tabacum]
gi|1762945|gb|AAC49975
Length = 158
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Frame = -3
Query: 421 SLMSSKLIPSTTLLEDWLIVGWFGESANRSASSCDGDFTEPGDSLTGACGDGIGPVRCRR 242
S + L S LL W FGE RSA S F + +T G + PV +
Sbjct: 5 SFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPVDMKI 64
Query: 241 C*FAPLALWDV---VIVISPFDAASLLILFMAAA 149
A +AL + + V A LL+L A A
Sbjct: 65 LVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVA 98
>At4g10840.2 68417.m01764 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 531
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 TGPIPSP-HAPVKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVD 395
T P+ +P P+K +P S S S + + PT+S S++ V+D
Sbjct: 26 TQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTAAVID 73
>At4g10840.1 68417.m01765 kinesin light chain-related low similarity
to kinesin light chain [Plectonema boryanum] GI:2645229;
contains Pfam profile PF00515 TPR Domain
Length = 609
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 TGPIPSP-HAPVKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVD 395
T P+ +P P+K +P S S S + + PT+S S++ V+D
Sbjct: 26 TQPLSNPPRTPMKKTPSSTPSRSKPSPNRSTGKKDSPTVSSSTAAVID 73
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +3
Query: 147 GAAAMNSINRLAASNGEITI--TTSHNASGAN*QRRQRTGPIPSPHAPVKLSPGSVKSPS 320
G A R+ NG+ + + S ++S ++ G + S H S GSV S
Sbjct: 172 GTAESEKSKRIKIWNGKRAVEDSDSDDSSDEEDEKSVVGGQVDSDHKDTDESSGSVLDGS 231
Query: 321 HD-DADLLADSPNQPTISQSSSNVVDGINLEDIKEFAKAFKLRRL 452
HD + D + + + + VV IN E + +FA A + +L
Sbjct: 232 HDGENDFVVHQSSD--VVKGEITVVQRINEEKMDDFAVADAMDQL 274
>At1g05380.1 68414.m00546 PHD finger transcription factor, putative
Length = 600
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 349 ESANRSASSCDGDFTEPGDSLTGACGDGIGPVRCRRC 239
++ N + D D +P D G CGDG + C C
Sbjct: 69 DATNLALHQVDTDGDDPNDDACGICGDGGDLICCDGC 105
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 655 SLELEPSKKRKRRTFVHTSGLRTSSTGH 738
SLEL P R F+HT GLR S G+
Sbjct: 695 SLELSPVDGRTLTDFMHTRGLRMRSLGY 722
>At4g04920.1 68417.m00715 expressed protein
Length = 1250
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 689 RLRFLLGSNSNEVRQMIFDRNAYLFLGFLHPTFEA 585
+ R L G+N+ EVR M+ D A L L L E+
Sbjct: 733 KCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIES 767
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 513 IVKVRSADLRNWI*HQKVRRKSNRCFERWMKEAEEKVRIPVKNHLTDFIGIGAEQKAQTA 692
+ + DLRNW R E K+ K+ P N+ +DF+GI A +A +
Sbjct: 142 VAHLAGEDLRNW-------RSEAEMLENIAKDVSNKL-FPPSNNFSDFVGIEAHIEALIS 193
Query: 693 NIR 701
+R
Sbjct: 194 MLR 196
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 513 IVKVRSADLRNWI*HQKVRRKSNRCFERWMKEAEEKVRIPVKNHLTDFIGIGAEQKAQTA 692
+ + DLRNW R E K+ K+ P N+ +DF+GI A +A +
Sbjct: 142 VAHLAGEDLRNW-------RSEAEMLENIAKDVSNKL-FPPSNNFSDFVGIEAHIEALIS 193
Query: 693 NIR 701
+R
Sbjct: 194 MLR 196
>At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 520
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 513 IVKVRSADLRNWI*HQKVRRKSNRCFERWMKEAEEKVRIPVKNHLTDFIGIGAEQKAQTA 692
+ + DLRNW R E K+ K+ P N+ +DF+GI A +A +
Sbjct: 142 VAHLAGEDLRNW-------RSEAEMLENIAKDVSNKL-FPPSNNFSDFVGIEAHIEALIS 193
Query: 693 NIR 701
+R
Sbjct: 194 MLR 196
>At5g58140.4 68418.m07274 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 689
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 374 VFQQRSRWDQLRRHQGIREGLQTATT 451
V QR WD R + IR+G+ ATT
Sbjct: 358 VIGQRDSWDLSDRERDIRQGIDLATT 383
>At5g58140.3 68418.m07277 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 374 VFQQRSRWDQLRRHQGIREGLQTATT 451
V QR WD R + IR+G+ ATT
Sbjct: 358 VIGQRDSWDLSDRERDIRQGIDLATT 383
>At5g58140.2 68418.m07276 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 374 VFQQRSRWDQLRRHQGIREGLQTATT 451
V QR WD R + IR+G+ ATT
Sbjct: 358 VIGQRDSWDLSDRERDIRQGIDLATT 383
>At5g58140.1 68418.m07275 protein kinase family protein / non
phototropic hypocotyl 1-like protein (NPL1) contains
Pfam domains, PF00069: Protein kinase domain and
PF00785: PAC motif; similar to SP:O48963 Nonphototropic
hypocotyl protein 1 (Phototropin) [Mouse-ear
cress] {Arabidopsis thaliana}; identical to cDNA non
phototropic hypocotyl 1-like (NPL1) GI:5391441
Length = 915
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 374 VFQQRSRWDQLRRHQGIREGLQTATT 451
V QR WD R + IR+G+ ATT
Sbjct: 358 VIGQRDSWDLSDRERDIRQGIDLATT 383
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Frame = +3
Query: 150 AAAMNSINRLAASNGEITITTSHNASGAN*QRRQRTGPIPSPHAPVKLSP--GSVKSPSH 323
++ NS NR + GE +++ N ++ + + + P K P S+KS S
Sbjct: 287 SSVKNSTNR-NSQGGETAKSSNRNKLNSSTKPNTPSASSTATRNPRKKRPIPSSIKSKSS 345
Query: 324 DDADLLADSPNQPTISQSSSNVVDGINLEDIKEFAKAFKLRRLGLGLTQTQVGQALSVT 500
DD ++ +P+I++ S + + ++ + + + G ++Q ++VT
Sbjct: 346 DDEAKSSERNRRPSIARPSVSDDETLSSSTARRSSNLIPTTKSARGKPKSQTSSRVAVT 404
>At5g67180.1 68418.m08469 AP2 domain-containing transcription
factor, putative similar to (SP:P47927) Floral homeotic
protein APETALA2. [Mouse-ear cress] {Arabidopsis
thaliana}
Length = 352
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 476 SRPSPVGHRRTAYSQSAICRFEKLDITPK--SAQKIKPVLRTLDEGSRGKGTHSG 634
SR +PVGH SQSA L +T AQ ++P +R S GK SG
Sbjct: 16 SRGNPVGHVSNGMSQSATWLPFVLPVTRNFFPAQSMEPGVRWSGFNSVGKSDPSG 70
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 273 PHAPVKLSPGSVKSP--SHDDADLLADSPNQPTISQSSSNVVDGINLEDIK 419
P V+ S GS++S S D D L D+PN S + G+N ++++
Sbjct: 1489 PLMGVRSSTGSLRSRHVSRDSGDYLIDTPNSGEDVLHSGIAMHGVNAKELQ 1539
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 357 QPTISQSSSNVVDGINLEDIKEFAKAFKLRRLGLGLTQTQVGQALSVTEGPHIV 518
QP + + N+ NLE + +A KL RL LG ++ V S+ H++
Sbjct: 628 QPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKNLQHLI 681
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this
gene; contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 655 SLELEPSKKRKRRTFVHTSGLRTSSTGH 738
SLEL P R F+H GL+ S GH
Sbjct: 687 SLELSPVDGRTLTDFMHIRGLQMRSLGH 714
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,477,073
Number of Sequences: 28952
Number of extensions: 320686
Number of successful extensions: 1180
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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