Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0579
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g37020.1 68414.m04616 Ulp1 protease family protein 33 0.19
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 32 0.43
At1g34320.1 68414.m04259 expressed protein contains Pfam domain ... 30 1.8
At2g35110.1 68415.m04307 HEM protein-related weak similarity to ... 29 3.1
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb... 29 3.1
At4g10270.1 68417.m01688 wound-responsive family protein similar... 29 4.0
At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domai... 28 5.3
At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putati... 28 5.3
At1g02330.1 68414.m00178 expressed protein contains similarity t... 28 5.3
At5g18980.1 68418.m02255 expressed protein 27 9.3
At4g26050.1 68417.m03750 leucine-rich repeat family protein cont... 27 9.3
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 27 9.3
At1g09250.1 68414.m01033 expressed protein 27 9.3
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 279 EDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTT 458
EDE LQ KI+ ++ K+K + K+ ++ + + VKE +V T V+K T
Sbjct: 253 EDETPNKELELQLKIKDATKGKKKKVAIMPKKASKIPKKKMAKVKEMKV--STPKVLKKT 310
Query: 459 AEKTSSIIGGITAGVSRSSVRCA 527
+ +G +T V +++ A
Sbjct: 311 MRRDDDYVGDVTEKVVADTLKMA 333
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +3
Query: 267 LARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESV 446
+ +E E+A LRTV + ++ +L+ KLG KE+ E + + + E
Sbjct: 146 IEELEKEVAGLRTVKEENEKRMKELESKLGALEVKELDEKNKKFRAEEEMREKIDNKEKE 205
Query: 447 IKTTAEKTSSIIGGITAG 500
+ EK S+ + G
Sbjct: 206 VHDLKEKIKSLESDVAKG 223
>At1g34320.1 68414.m04259 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 657
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 276 VEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNV 410
V D +A LRT L+S+ + +LK+K ++W I E+V + L +V
Sbjct: 308 VGDTLAILRTELKSQKKHVRNLKKK---SLWSRILEEVMEKLVDV 349
>At2g35110.1 68415.m04307 HEM protein-related weak similarity to
Membrane-associated protein Hem (Dhem-2)
(Swiss-Prot:P55162) [Drosophila melanogaster]; weak
similarity to Nck-associated protein 1 (NAP 1)
(p125Nap1) (Membrane-associated protein HEM-2)
(Swiss-Prot:P55161) [Rattus norvegicus]
Length = 1339
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 505 DTPAVMPPMIEDVFSAVVFITDSVFWY 425
D P+++ P I+ VFSA+ V WY
Sbjct: 417 DQPSLLAPNIQMVFSALALAQSEVLWY 443
>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
(RbohE) / NADPH oxidase nearly identical to respiratory
burst oxidase protein E GI:3242787 [gi:3242787] from
[Arabidopsis thaliana]
Length = 926
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 98 HSFHTVRVFHCKI*AVFKQLKKQCQ 172
H TV VF+C I V K+LKKQ Q
Sbjct: 885 HPNSTVGVFYCGIQTVAKELKKQAQ 909
>At4g10270.1 68417.m01688 wound-responsive family protein similar to
wound induced protein (GI:19320) [Lycopersicon
esculentum]
Length = 90
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 339 LKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSS 476
LK +LG+ W I VNQ L+N S K S +A TSS
Sbjct: 20 LKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTSS 65
>At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 682
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 527 NSESFRSIEERVGSAYENVKGKVASRSNSTQSFDEALR 640
N +F IEE +G EN+ K++S++ + S + R
Sbjct: 215 NEVAFNIIEEELGQPLENIFSKISSQTIAAASLGQVYR 252
>At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putative
similar to UDP-glucose glucosyltransferase GI:3928543
from [Arabidopsis thaliana]
Length = 489
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +3
Query: 318 KIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGI 491
+I ++S++ RKLG+ +W+E TE ++ +++ +Y S+ T+E+ G+
Sbjct: 265 EIDKNSEI-RKLGLNLWEEETESLDWLDTKAEKAVIYVNFGSLTVLTSEQILEFAWGL 321
>At1g02330.1 68414.m00178 expressed protein contains similarity to
hepatocellular carcinoma-associated antigen 59
GI:7158847 from [Homo sapiens]
Length = 279
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 264 ELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQK 434
EL RVEDE+ + L+ K ++SS+ T E+ + LKN++E++ +K
Sbjct: 126 ELKRVEDELYKIPDHLKVK-KRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKK 181
>At5g18980.1 68418.m02255 expressed protein
Length = 835
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 357 ITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSRSS 515
+ +W +++ + +E + ++ E V++TTAE + + T G+SR S
Sbjct: 767 LAIWMMEDDELEDNVALFREMGLEKELEKVLETTAELENFDVFSGTVGLSRHS 819
>At4g26050.1 68417.m03750 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
Length = 383
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 381 EDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITA-GVSRSSVRCATR 533
E V QGL+ +K+ + TES KT +K S IG + G+S S R R
Sbjct: 286 EVVEQGLEALKQYMSEKMTESYKKTPTKKKSWGIGKLVKYGLSSSPGRSTGR 337
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +2
Query: 506 QKLGQMRNSESFRSIEERVGSAYENVKGKV-----ASRSNSTQSFDEA 634
++ + + E+ + +E+ GSAYE K KV + + ++QS+D A
Sbjct: 80 KEAAKRKAEEAVGAAKEKAGSAYETAKSKVEEGLASVKDKASQSYDSA 127
>At1g09250.1 68414.m01033 expressed protein
Length = 207
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +2
Query: 392 SGFEKRQRKPSIPKN*ICDKNDRREDVFDHRRHHGRRVQKLGQMRNSESFRSIEERVGSA 571
+G R++KP I + + RR + +R RVQ++ + E+ R + +R +
Sbjct: 12 TGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRVRQRSSTT 71
Query: 572 YENVKGKVAS 601
N K+ S
Sbjct: 72 SNNETDKLVS 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,506,530
Number of Sequences: 28952
Number of extensions: 258034
Number of successful extensions: 839
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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