Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0578
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   4.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.8  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   5.8  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -2

Query: 436 TLVPRIKRNAKR-NKVQIVR 380
           TLVP + R+AKR +K  I+R
Sbjct: 53  TLVPMVARSAKRMDKTSILR 72


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 23  VTLRMTCFFVIALTRH 70
           VTL   C+F+I L  H
Sbjct: 507 VTLTSVCYFMIGLNSH 522


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -2

Query: 418 KRNAKRNKVQIVRSCIKADASLQKYHHGPCQPDNFAAPMNTG 293
           KR+ +RN+  + ++  +    + K H   C+        N G
Sbjct: 63  KRSIRRNRQYVCKAKDEGSCIIDKTHRNQCRACRLKKCQNVG 104


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -2

Query: 418 KRNAKRNKVQIVRSCIKADASLQKYHHGPCQPDNFAAPMNTG 293
           KR+ +RN+  + ++  +    + K H   C+        N G
Sbjct: 63  KRSIRRNRQYVCKAKDEGSCIIDKTHRNQCRACRLKKCQNVG 104


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 674 IIVTAWLEIFCV 639
           +IV  W+ +FCV
Sbjct: 305 LIVNTWISLFCV 316


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 474 ALFCSVDVTTVAESIFSFYTEAT 542
           +L  S+ +  +  ++ SFY EAT
Sbjct: 70  SLLNSIQIRCIESNMISFYLEAT 92


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 141 NINSQNYPRPSVLSLFVTSVAVDDK 215
           NI   ++P+ + LSLF+  +  ++K
Sbjct: 73  NIGGYDFPKDTFLSLFIYGMHHNEK 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,185
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)