Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0578
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061568-1|AAL29116.1|  691|Drosophila melanogaster SD01152p pro...    29   8.5  
AY052074-1|AAK93498.1|  499|Drosophila melanogaster SD02971p pro...    29   8.5  
AE014296-3074|AAN11673.1|  555|Drosophila melanogaster CG3961-PB...    29   8.5  
AE014296-3073|AAN11672.1|  704|Drosophila melanogaster CG3961-PC...    29   8.5  
AE014296-3072|AAF49219.1|  704|Drosophila melanogaster CG3961-PA...    29   8.5  

>AY061568-1|AAL29116.1|  691|Drosophila melanogaster SD01152p
           protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 228 LLTPTYRQRLPMLRTVTIPMAEDNFENL 145
           LLTPT++ + P L++   P  ED +++L
Sbjct: 663 LLTPTFKAKRPQLKSYFKPQLEDMYKHL 690


>AY052074-1|AAK93498.1|  499|Drosophila melanogaster SD02971p
           protein.
          Length = 499

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 228 LLTPTYRQRLPMLRTVTIPMAEDNFENL 145
           LLTPT++ + P L++   P  ED +++L
Sbjct: 471 LLTPTFKAKRPQLKSYFKPQLEDMYKHL 498


>AE014296-3074|AAN11673.1|  555|Drosophila melanogaster CG3961-PB,
           isoform B protein.
          Length = 555

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 228 LLTPTYRQRLPMLRTVTIPMAEDNFENL 145
           LLTPT++ + P L++   P  ED +++L
Sbjct: 527 LLTPTFKAKRPQLKSYFKPQLEDMYKHL 554


>AE014296-3073|AAN11672.1|  704|Drosophila melanogaster CG3961-PC,
           isoform C protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 228 LLTPTYRQRLPMLRTVTIPMAEDNFENL 145
           LLTPT++ + P L++   P  ED +++L
Sbjct: 676 LLTPTFKAKRPQLKSYFKPQLEDMYKHL 703


>AE014296-3072|AAF49219.1|  704|Drosophila melanogaster CG3961-PA,
           isoform A protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 228 LLTPTYRQRLPMLRTVTIPMAEDNFENL 145
           LLTPT++ + P L++   P  ED +++L
Sbjct: 676 LLTPTFKAKRPQLKSYFKPQLEDMYKHL 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,968,702
Number of Sequences: 53049
Number of extensions: 632720
Number of successful extensions: 1360
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)