Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0578
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.72 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   8.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = -2

Query: 421 IKRNAKRNKVQIVRSCIKADASLQKYHHGPCQPDNFAAPMNTGGRRTKT 275
           I R+  RNKV  +    + DASL   H  P +P   A  + T    T T
Sbjct: 619 IPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTITTITTTTTT 667


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 253 SVVCFRKRFLSVVPRCSLVLQ 315
           SV C R+ F+  + RC L L+
Sbjct: 423 SVNCLRESFIGTLQRCLLSLE 443


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 253 SVVCFRKRFLSVVPRCSLVLQ 315
           SV C R+ F+  + RC L L+
Sbjct: 461 SVNCLRESFIGTLQRCLLSLE 481


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 98  YHNYDYIN*RYEILEYK 148
           YH+ D +  + EI+EYK
Sbjct: 164 YHHMDSVEYKPEIMEYK 180


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 62  TRHLSSTAFSNIYHNYDYIN*RY 130
           T H ++   +N Y+NY+Y N  Y
Sbjct: 89  TIHNNNNYNNNNYNNYNYNNNNY 111


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 492 DVTTVAESIFSFYTEATWR*LNSL 563
           DVT  A  ++ F    +WR  N+L
Sbjct: 202 DVTGFALLVYDFRNSRSWRITNNL 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,117
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)