Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0577
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   0.93 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   0.93 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   0.93 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   0.93 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.8  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 NMFANLFKGLFGKKEMRILMVGLDAA 206
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 NMFANLFKGLFGKKEMRILMVGLDAA 206
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 NMFANLFKGLFGKKEMRILMVGLDAA 206
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 129 NMFANLFKGLFGKKEMRILMVGLDAA 206
           N+FA+ F  +FGK   +I++ G   A
Sbjct: 384 NIFASYFAYIFGKFACKIMIQGFSYA 409


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 278 VETVEYKNISFTVWDVGGQDKIRPL 352
           +E +  KNI  TV + G   K++PL
Sbjct: 540 LEELNLKNIDLTVLESGAFCKMQPL 564


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 84  ELEKKRNTNEFLTIR 40
           ELEK+ +TN +LT R
Sbjct: 237 ELEKEFHTNHYLTRR 251


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 220 IVVLPAASKPTINILISFLPKRPLNKFAN 134
           +V L   S   I ++ISF+ K+    F N
Sbjct: 85  VVSLSGNSAVFIMLIISFMHKKSFKNFVN 113



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 258 IVLQFHLI*VCTELWFYQLHPN 193
           IV+ FHLI     L+F  L  N
Sbjct: 44  IVIIFHLILFAVLLYFASLEKN 65


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
          protein.
          Length = 96

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 84 ELEKKRNTNEFLTIR 40
          ELEK+ +TN +LT R
Sbjct: 19 ELEKEFHTNHYLTRR 33


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 154 PLNKFANIFPILNYYEY 104
           PL K+ NIF I  +Y++
Sbjct: 17  PLVKYLNIFFITPWYDF 33


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 218 CGFTSCIQTNHQYSHFL 168
           CG+ S +++NH+   F+
Sbjct: 39  CGYHSPLESNHKLVTFI 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,571
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)