Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0577
(427 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 121 4e-29
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 105 3e-24
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 67 9e-13
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 54 9e-09
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 40 2e-04
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 40 2e-04
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 37 0.001
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 36 0.003
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 36 0.003
SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyce... 31 0.075
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 31 0.099
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 30 0.17
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 30 0.17
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 29 0.23
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 28 0.70
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 27 0.92
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 27 1.2
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 27 1.2
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 26 2.1
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 26 2.1
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 2.1
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 26 2.8
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 2.8
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 26 2.8
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 25 3.7
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 25 3.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 4.9
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 25 4.9
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 25 4.9
SPAC30C2.06c |dml1||mitochondrial genome maintenance protein |Sc... 25 4.9
SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase Bgl2|Schizosacch... 25 6.5
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 25 6.5
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 25 6.5
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 24 8.6
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 24 8.6
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 24 8.6
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 24 8.6
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 24 8.6
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 121 bits (292), Expect = 4e-29
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +2
Query: 254 TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRERI 421
TIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYF NTQG+IFVVDSNDRERI
Sbjct: 45 TIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERI 100
Score = 77.8 bits (183), Expect = 7e-16
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +3
Query: 123 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTQFPLL 269
MG + LF+ LFGK+EMRILMVGLDAAGKTTILYKLKLGEIVT P +
Sbjct: 1 MGLSISKLFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 105 bits (252), Expect = 3e-24
Identities = 46/56 (82%), Positives = 48/56 (85%)
Frame = +2
Query: 254 TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRERI 421
TIPT+GFNVETV YKNI F VWDVGGQDKIRPLWRHYF T+GLIFVVDS D RI
Sbjct: 49 TIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRI 104
Score = 60.5 bits (140), Expect = 1e-10
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +3
Query: 135 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTQFP 263
F+ F LF KEMRILM+GLDAAGKTTILYKLKL + V P
Sbjct: 9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIP 51
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 67.3 bits (157), Expect = 9e-13
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +2
Query: 260 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRERI 421
PT GF + T+E + + FT+WD+GGQ +R W++YF +T+ +I+VVDS D R+
Sbjct: 46 PTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRL 99
Score = 33.9 bits (74), Expect = 0.011
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 165 KKEMRILMVGLDAAGKTTILYKLKLGEIVTQ 257
++E+R+L++GLD AGKTTIL K L E V +
Sbjct: 14 EREVRVLLLGLDNAGKTTIL-KCLLNEDVNE 43
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 54.0 bits (124), Expect = 9e-09
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 260 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRERI 421
PT+ E + N+ FT +D+GG + R LWR YFP G++++VD D ER+
Sbjct: 50 PTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERL 103
Score = 33.1 bits (72), Expect = 0.019
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 168 KEMRILMVGLDAAGKTTILYKLKLGEIVTQFPLL 269
K ++L +GLD AGKTT+L+ LK + P L
Sbjct: 19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTL 52
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 39.9 bits (89), Expect = 2e-04
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 257 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRE 415
I TIG F + T E K + +WD GQ++ R + Y+ G+I V D D++
Sbjct: 38 ISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQD 94
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 39.5 bits (88), Expect = 2e-04
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +2
Query: 257 IPTIG--FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRE 415
I TIG F + T+E K I +WD GQ++ R + Y+ G++ + D D++
Sbjct: 39 ITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKK 95
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 37.1 bits (82), Expect = 0.001
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 290 EYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRE 415
+ K I +WD GQ+K R + R+Y+ G + V D +++
Sbjct: 58 QQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKD 99
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 35.9 bits (79), Expect = 0.003
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 257 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVV 397
I T G + ET + +DVGGQ R W H F N L+F+V
Sbjct: 219 IKTTGISEETFLLNRHHYRFFDVGGQRSERRKWIHCFENVTALLFLV 265
Score = 26.6 bits (56), Expect = 1.6
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +3
Query: 162 GKKEMRILMVGLDAAGKTTILYKLKL 239
G ++++L++G +GKTTI+ +++L
Sbjct: 71 GGNDIKVLLLGAGDSGKTTIMKQMRL 96
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 35.5 bits (78), Expect = 0.003
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 263 TIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDRER 418
T+G + + ++ ++DVGGQ R W + F N +IF V ND ++
Sbjct: 179 TLGISEISFTLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDK 230
>SPAPB1A10.03 |nxt1||mRNA export receptor Nxt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 31.1 bits (67), Expect = 0.075
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 406 VTVYYED*PLCIWEIMPPQWSDFV-LASNIPHSKTNVFVFYCLHIKANSGNCVTI 245
+ +Y + L +W P Q ++F + N+P+SKT V F + N N + +
Sbjct: 26 IAEFYRENSLILWNGKPMQVTEFTSMIVNLPYSKTKVEDFDSQQVMGNDMNIIIV 80
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 30.7 bits (66), Expect = 0.099
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 245 NCNTIPTIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVD 400
N + TIG T ++ K I +WD GQ++ R + Y+ G + V D
Sbjct: 36 NIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYD 91
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.9 bits (64), Expect = 0.17
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = +2
Query: 299 NISFTVWDVGGQDKIRPLW-----RHYFPNTQGLIFVVDSNDRE 415
N+ +WD GGQ+ + H F N Q LI+V D RE
Sbjct: 50 NLVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 29.9 bits (64), Expect = 0.17
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = -1
Query: 217 VVLPAASKPTINILISFLPKRPLNKFANIFPILNYYEYNFQKQSRIREKTQHQ*IPNNSR 38
+++PA P + I++ +L +R NK NI I+NY + EK N ++
Sbjct: 246 IIMPAVMTPAV-IILMYL-ERQANKDENIKKIINY---------QTEEK-------NKNK 287
Query: 37 MSKWRRTWKFV 5
SKW++ WK V
Sbjct: 288 QSKWQKLWKAV 298
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 29.5 bits (63), Expect = 0.23
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 257 IPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSNDR 412
I T+G V + + I F VWD GQ+K+ L Y+ Q I + D R
Sbjct: 39 IATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSR 94
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 27.9 bits (59), Expect = 0.70
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 290 EYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVD 400
E ++ +WD GQ++ + L Y+ N I V D
Sbjct: 60 ENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYD 96
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 27.5 bits (58), Expect = 0.92
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +2
Query: 266 IGFNVETVEYKN--ISFTVWDVGGQ 334
+ F +T+ +N I+F++WD+GGQ
Sbjct: 45 VNFMEKTISIRNTEITFSIWDLGGQ 69
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 287 VEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVD 400
+E + + +WD GQ++ R L Y ++ I V D
Sbjct: 55 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYD 92
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.1 bits (57), Expect = 1.2
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Frame = +2
Query: 257 IPTIGFN-VETVEY--KNISFTVWDVGGQ---DKIRPLWRHYFPNTQGLI--FVVDSND 409
+PT+ N V VE +++ +WD GQ D++RPL +P++ ++ F VDS D
Sbjct: 36 VPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPL---SYPDSHVILICFAVDSPD 91
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 2.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 180 ILMVGLDAAGKTTILYKLKL 239
I+MVGL +GKTT KL L
Sbjct: 104 IMMVGLQGSGKTTTCSKLAL 123
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 26.2 bits (55), Expect = 2.1
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 287 VEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSND 409
V+ K ++ +WD GQ++ + L ++ + V D N+
Sbjct: 52 VDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNN 92
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 2.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 144 LFKGLFGKKEMRILMVGLDAAGKTTI 221
L K ++GK+ + I+ +G AGK+T+
Sbjct: 229 LLKDMYGKEHVNIVFIGHVDAGKSTL 254
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 25.8 bits (54), Expect = 2.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 358 PPQWSDFVLASNIPHSKTNVFVFY 287
PP+ SDF++ S H + N F F+
Sbjct: 257 PPEVSDFLIKSFYGHVQANFFFFH 280
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 2.8
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +3
Query: 3 RTNFHVRRHFDIRELLGIHWCC 68
+ N + HF+ +G +WCC
Sbjct: 467 KINHRIPHHFESHTNIGANWCC 488
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 2.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 373 IWEIMPPQWSDFVLASNI 320
+W + PP++SD V AS++
Sbjct: 225 LWGVDPPEFSDIVFASDV 242
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 25.4 bits (53), Expect = 3.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 373 IWEIMPPQWSDFVLASNIPHSKTNVFVFYCLHIKANSGNCVTI 245
+ +I PQ+ D+ + I + T + + YCL + N G+C+ I
Sbjct: 114 VGQIHMPQYKDWDI--KITNGNT-IGLEYCLRLLVNRGDCILI 153
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.4 bits (53), Expect = 3.7
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 287 VEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLI--FVVDSND 409
V+ +I ++WD GQ++ L + +T ++ F VDS D
Sbjct: 56 VDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD 98
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.0 bits (52), Expect = 4.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 165 KKEMRILMVGLDAAGKTTILYKL 233
KK I++VG+ +GKTT + +L
Sbjct: 6 KKPCAIIVVGMAGSGKTTFMQQL 28
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 4.9
Identities = 11/20 (55%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -2
Query: 351 SGLILSWPPTSHTV-KLMFL 295
SG+ILSW P+S + K++FL
Sbjct: 128 SGIILSWSPSSFLLGKIVFL 147
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 25.0 bits (52), Expect = 4.9
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = +2
Query: 287 VEYKNISFTVWDVGGQDKIRPLWRHYFPNTQGLIFVVDSND 409
V+ K ++ +WD GQ++ + L ++ + V + N+
Sbjct: 52 VDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNN 92
>SPAC30C2.06c |dml1||mitochondrial genome maintenance protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 465
Score = 25.0 bits (52), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 353 WRHYFPNTQGLIFVVDSNDRERI 421
W H++ NTQ FV D ND ++
Sbjct: 17 WTHFW-NTQESYFVYDPNDHAKV 38
>SPAC26H5.08c |bgl2||glucan 1,3-beta-glucosidase
Bgl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 321
Score = 24.6 bits (51), Expect = 6.5
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = -1
Query: 334 LASNIPHSKTNVFVFYCLHIKANSGNCVTISPNLSLYRIVVLPAASKPTINILISFLPKR 155
+AS+ + TN + +CL +K G C L+ + ++ P N++ ++
Sbjct: 29 IASSTKPASTNGTLSFCLGVKHADGTCKYTDDYLADFEVLA------PYTNMIRTYATS- 81
Query: 154 PLNKFANIFPILNYYEYNF 98
N + P L YNF
Sbjct: 82 DCNTLEYLLPALAQSPYNF 100
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 24.6 bits (51), Expect = 6.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Frame = +2
Query: 257 IPTIGFN-VETVEY--KNISFTVWDVGGQ---DKIRPL 352
+PT+ N V VE ++I +WD GQ D++RPL
Sbjct: 36 VPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPL 73
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.6 bits (51), Expect = 6.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 254 TIPTIGFNVETVEYKNISFTVW 319
T P F+++ EY N+ VW
Sbjct: 240 TFPVNSFSIDGCEYNNVKALVW 261
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 24.2 bits (50), Expect = 8.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 168 KEMRILMVGLDAAGKTTILYKLKLGE 245
K R L+VG + AGK+T+L KL G+
Sbjct: 29 KGSRTLLVGANGAGKSTLL-KLLSGK 53
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 24.2 bits (50), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 348 GLILSWPPTSHTVKLMFLYSTVSTLKPIV 262
G++++ S MFL T+ST KPIV
Sbjct: 119 GIVITHGTDSLEETAMFLDLTISTAKPIV 147
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 24.2 bits (50), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 348 GLILSWPPTSHTVKLMFLYSTVSTLKPIV 262
G++++ S MFL T+ST KPIV
Sbjct: 119 GIVITHGTDSLEETAMFLDLTISTAKPIV 147
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 408 SLLSTTKISPCVFGK*CLHSGLILSWPPTSHTVKLMFLYSTVSTLKPIV 262
++L+ T++ K +H G++++ S MFL TV+T KPIV
Sbjct: 103 NVLNLTQLILAEVAKPDVH-GIVVTHGTDSLEETAMFLDMTVNTTKPIV 150
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 24.2 bits (50), Expect = 8.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 425 RRYVPDRYCLLRRLAPVYLGNNASTVV*FCL 333
R +VP R L RL LG N TV+ C+
Sbjct: 337 RAHVPYRDSKLTRLLKFSLGGNCRTVMIVCV 367
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,966,910
Number of Sequences: 5004
Number of extensions: 42407
Number of successful extensions: 146
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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