Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0576
(472 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HDZ3 Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bo... 91 1e-17
UniRef50_UPI00015B5C7C Cluster: PREDICTED: similar to ENSANGP000... 60 3e-08
UniRef50_Q24491 Cluster: RNA-binding protein Rsf1; n=6; Endopter... 58 1e-07
UniRef50_Q02427 Cluster: RNA-binding protein 1; n=4; Endopterygo... 57 2e-07
UniRef50_Q5DAB2 Cluster: SJCHGC09413 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_Q9V3V0 Cluster: CG10203-PA; n=4; Bilateria|Rep: CG10203... 53 3e-06
UniRef50_Q16629 Cluster: Splicing factor, arginine/serine-rich 7... 53 3e-06
UniRef50_UPI0000EB2D12 Cluster: Splicing factor; n=1; Canis lupu... 52 5e-06
UniRef50_Q4RXP9 Cluster: Chromosome 11 SCAF14979, whole genome s... 52 5e-06
UniRef50_P84103 Cluster: Splicing factor, arginine/serine-rich 3... 52 5e-06
UniRef50_Q18409-2 Cluster: Isoform b of Q18409 ; n=2; Caenorhabd... 50 3e-05
UniRef50_UPI0000588F7D Cluster: PREDICTED: similar to arginine/s... 50 3e-05
UniRef50_Q1RL73 Cluster: Zinc finger protein; n=1; Ciona intesti... 49 6e-05
UniRef50_UPI0000E47B28 Cluster: PREDICTED: hypothetical protein;... 48 1e-04
UniRef50_UPI0000588D5D Cluster: PREDICTED: similar to GA10154-PA... 47 2e-04
UniRef50_A2YA47 Cluster: Putative uncharacterized protein; n=2; ... 47 2e-04
UniRef50_A7AR72 Cluster: Splicing factor, arginine/serine-rich 3... 46 6e-04
UniRef50_A7Q2E1 Cluster: Chromosome chr1 scaffold_46, whole geno... 45 7e-04
UniRef50_O81126 Cluster: 9G8-like SR protein; n=13; Magnoliophyt... 44 0.002
UniRef50_Q5BTG2 Cluster: SJCHGC01414 protein; n=2; Schistosoma j... 44 0.002
UniRef50_UPI00006A1008 Cluster: UPI00006A1008 related cluster; n... 43 0.003
UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;... 42 0.005
UniRef50_Q5YES7 Cluster: Splicing factor; n=1; Bigelowiella nata... 42 0.005
UniRef50_Q5DDS2 Cluster: SJCHGC01826 protein; n=2; Schistosoma j... 42 0.009
UniRef50_Q4UCK9 Cluster: RNA-binding protein, putative; n=2; The... 41 0.012
UniRef50_Q15ET7 Cluster: Alternative splicing factor SRp20/9G8-l... 38 0.084
UniRef50_O18219 Cluster: Putative uncharacterized protein; n=2; ... 38 0.084
UniRef50_P26686-8 Cluster: Isoform I of P26686 ; n=1; Drosophila... 38 0.15
UniRef50_Q54Q30 Cluster: RNA-binding region-containing protein; ... 37 0.19
UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2; ... 36 0.45
UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep... 36 0.59
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 35 0.78
UniRef50_Q98RZ7 Cluster: Polyadenylate-binding protein; n=1; Gui... 34 1.4
UniRef50_A0BVN1 Cluster: Chromosome undetermined scaffold_130, w... 34 1.8
UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1 pro... 33 2.4
UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS intera... 33 2.4
UniRef50_Q91BI2 Cluster: Baculovirus J domain protein; n=2; Spod... 33 2.4
UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich pr... 33 2.4
UniRef50_Q2BKK5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18; Eute... 33 3.2
UniRef50_Q95JS6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_Q2J9J4 Cluster: Rieske (2Fe-2S) protein; n=1; Frankia s... 32 5.5
UniRef50_Q9XVK6 Cluster: Putative uncharacterized protein wve-1;... 32 5.5
UniRef50_Q10021 Cluster: Probable splicing factor, arginine/seri... 32 5.5
UniRef50_A3ESJ7 Cluster: Putative signal transduction protein; n... 32 7.3
UniRef50_Q5KAK6 Cluster: Expressed protein; n=1; Filobasidiella ... 32 7.3
UniRef50_UPI0000E47584 Cluster: PREDICTED: similar to Nuclear re... 31 9.7
UniRef50_Q9FIB8 Cluster: Splicing factor-like protein; n=12; Mag... 31 9.7
UniRef50_A7P8E1 Cluster: Chromosome chr3 scaffold_8, whole genom... 31 9.7
UniRef50_Q56UE6 Cluster: Splicing factor-like protein; n=1; Lymn... 31 9.7
UniRef50_Q55ED3 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 31 9.7
>UniRef50_Q1HDZ3 Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 -
Bombyx mori (Silk moth)
Length = 143
Score = 90.6 bits (215), Expect = 1e-17
Identities = 51/79 (64%), Positives = 52/79 (65%)
Frame = +2
Query: 80 MSSGGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGS 259
MSSGGTRVYVGGLVEGIKKEDLEREF K + P F F L S
Sbjct: 1 MSSGGTRVYVGGLVEGIKKEDLEREFAKYGKLNSVWVALNPPGFAFIEFENLQEAEDACS 60
Query: 260 AMNGTEMLGATLKVEISRK 316
AMNGTEMLGATLKVEISRK
Sbjct: 61 AMNGTEMLGATLKVEISRK 79
>UniRef50_UPI00015B5C7C Cluster: PREDICTED: similar to
ENSANGP00000022151; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022151 - Nasonia
vitripennis
Length = 497
Score = 59.7 bits (138), Expect = 3e-08
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+ S S+ +I +A S KYG L +VWVA NPPGFAF+EFE+ ++AEDAV
Sbjct: 19 LGSSASKHEIESAFS-KYGPLRNVWVARNPPGFAFVEFEDPRDAEDAV 65
>UniRef50_Q24491 Cluster: RNA-binding protein Rsf1; n=6;
Endopterygota|Rep: RNA-binding protein Rsf1 - Drosophila
melanogaster (Fruit fly)
Length = 197
Score = 57.6 bits (133), Expect = 1e-07
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
KYGKLNSVW+A NPPGFAF+EFE+ +AE A
Sbjct: 29 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 59
Score = 52.8 bits (121), Expect = 4e-06
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
GTRVYVG L + +KK+DLE EF K + P F F + +NG
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 65
Query: 272 TEMLGATLKVEISR 313
+E+LG+ L+VEIS+
Sbjct: 66 SELLGSQLRVEISK 79
>UniRef50_Q02427 Cluster: RNA-binding protein 1; n=4;
Endopterygota|Rep: RNA-binding protein 1 - Drosophila
melanogaster (Fruit fly)
Length = 144
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>UniRef50_Q5DAB2 Cluster: SJCHGC09413 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09413 protein - Schistosoma
japonicum (Blood fluke)
Length = 214
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 123 RESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
RE+ + +YG+L +VWVA NPPGFAF+EFE+ +A DAV
Sbjct: 19 REASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAV 63
Score = 35.9 bits (79), Expect = 0.45
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
GT+VY+G L + +LER F + + + P F F + A ++G
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 272 TEMLGATLKVEIS 310
T M G +VE+S
Sbjct: 69 TVMCGVRARVELS 81
>UniRef50_Q9V3V0 Cluster: CG10203-PA; n=4; Bilateria|Rep: CG10203-PA
- Drosophila melanogaster (Fruit fly)
Length = 258
Score = 53.2 bits (122), Expect = 3e-06
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVW+A NPPGFAF+EFE+ ++A DAV
Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61
>UniRef50_Q16629 Cluster: Splicing factor, arginine/serine-rich 7;
n=54; Eukaryota|Rep: Splicing factor,
arginine/serine-rich 7 - Homo sapiens (Human)
Length = 238
Score = 53.2 bits (122), Expect = 3e-06
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>UniRef50_UPI0000EB2D12 Cluster: Splicing factor; n=1; Canis lupus
familiaris|Rep: Splicing factor - Canis familiaris
Length = 232
Score = 52.4 bits (120), Expect = 5e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 25 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 55
>UniRef50_Q4RXP9 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 11 SCAF14979, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 222
Score = 52.4 bits (120), Expect = 5e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 32 YGPLRSVWVARNPPGFAFVEFEDPRDATDAV 62
>UniRef50_P84103 Cluster: Splicing factor, arginine/serine-rich 3;
n=54; cellular organisms|Rep: Splicing factor,
arginine/serine-rich 3 - Homo sapiens (Human)
Length = 164
Score = 52.4 bits (120), Expect = 5e-06
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>UniRef50_Q18409-2 Cluster: Isoform b of Q18409 ; n=2;
Caenorhabditis|Rep: Isoform b of Q18409 - Caenorhabditis
elegans
Length = 153
Score = 50.0 bits (114), Expect = 3e-05
Identities = 17/33 (51%), Positives = 29/33 (87%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+++G++ VWVA PPGFAF+E++++++AEDAV
Sbjct: 24 DRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAV 56
Score = 32.7 bits (71), Expect = 4.2
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 98 RVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNGTE 277
+VYVGGL ++LE F+ + + + + P F F ++ A++G+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 278 MLGATLKVEIS 310
+ G +VE+S
Sbjct: 64 ICGVRARVELS 74
>UniRef50_UPI0000588F7D Cluster: PREDICTED: similar to
arginine/serine-rich splicing factor 7; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
arginine/serine-rich splicing factor 7 -
Strongylocentrotus purpuratus
Length = 215
Score = 49.6 bits (113), Expect = 3e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G L SVW+A NPPGFAF+EF++ ++A DAV
Sbjct: 81 FGPLKSVWIARNPPGFAFVEFDDPRDASDAV 111
>UniRef50_Q1RL73 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 238
Score = 48.8 bits (111), Expect = 6e-05
Identities = 18/31 (58%), Positives = 28/31 (90%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG+L +VWVA +PPGFA++EFE+ ++A+DA+
Sbjct: 36 YGRLINVWVAKSPPGFAYVEFEDPRDADDAI 66
>UniRef50_UPI0000E47B28 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 272
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +3
Query: 129 SRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
++ +I A S KYG + +VW+A NPPGFAF+EF + ++A D+
Sbjct: 25 AKHEIEQAFS-KYGTITNVWIARNPPGFAFVEFMDSRDAYDS 65
>UniRef50_UPI0000588D5D Cluster: PREDICTED: similar to GA10154-PA;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10154-PA - Strongylocentrotus purpuratus
Length = 300
Score = 47.2 bits (107), Expect = 2e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
KYG L +W+A NPPGFAF+EFE +AE A+
Sbjct: 30 KYGHLVDIWMARNPPGFAFVEFETAGQAEAAL 61
Score = 31.9 bits (69), Expect = 7.3
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 98 RVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCG-SAMNGT 274
R+YVG L K+D+EREF + P F F E AG +NG
Sbjct: 9 RLYVGSLNHSTTKDDVEREFGKYGHLVDIWMARNPPGFAFVEF-ETAGQAEAALKELNGR 67
Query: 275 EMLGATLKVEISR 313
LG + VE SR
Sbjct: 68 TFLGNRIMVEPSR 80
>UniRef50_A2YA47 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 173
Score = 47.2 bits (107), Expect = 2e-04
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G L SVWVA PPGFAFI+F++ ++A+DA+
Sbjct: 25 FGVLRSVWVARKPPGFAFIDFDDRRDAQDAI 55
>UniRef50_A7AR72 Cluster: Splicing factor, arginine/serine-rich 3,
putative; n=1; Babesia bovis|Rep: Splicing factor,
arginine/serine-rich 3, putative - Babesia bovis
Length = 140
Score = 45.6 bits (103), Expect = 6e-04
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+K+G + ++WVA PPGFAF+ FE+ ++A DA+
Sbjct: 32 SKFGTIGNIWVARRPPGFAFVTFEDPRDATDAI 64
>UniRef50_A7Q2E1 Cluster: Chromosome chr1 scaffold_46, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_46, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 176
Score = 45.2 bits (102), Expect = 7e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 123 RESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
R S R++ + YG + SVWVA PPG+AF+EF + ++A DA+
Sbjct: 12 RVSERELED-EFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAI 55
>UniRef50_O81126 Cluster: 9G8-like SR protein; n=13;
Magnoliophyta|Rep: 9G8-like SR protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 200
Score = 44.0 bits (99), Expect = 0.002
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G + SVWVA PPG+AF++FE+ ++A DA+
Sbjct: 25 FGVVRSVWVARRPPGYAFLDFEDPRDARDAI 55
>UniRef50_Q5BTG2 Cluster: SJCHGC01414 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01414 protein - Schistosoma
japonicum (Blood fluke)
Length = 97
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR 263
++G + VWVA NPPGFAFI F+ ++A+ AV R
Sbjct: 40 RFGPIADVWVARNPPGFAFIVFKYAEDADRAVRR 73
Score = 33.5 bits (73), Expect = 2.4
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 86 SGGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAM 265
+ G RV+VGG+ + K D+E+EFE + P F F R M
Sbjct: 15 ANGYRVFVGGVDPRVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRM 74
Query: 266 NGTEMLGATLKVE 304
+G+ G+ L+VE
Sbjct: 75 DGSRPFGSRLRVE 87
>UniRef50_UPI00006A1008 Cluster: UPI00006A1008 related cluster; n=2;
Xenopus tropicalis|Rep: UPI00006A1008 UniRef100 entry -
Xenopus tropicalis
Length = 164
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 135 RKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
R + + YG L +WVA PPGFAF+EFE +A AV
Sbjct: 23 RAVLEQAFGVYGPLRWIWVAQKPPGFAFVEFEKPHDAAAAV 63
>UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 341
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
++YG + VWVA NPPGFAF+ + ++A+ AV
Sbjct: 33 DRYGPITDVWVARNPPGFAFVVYMYREDADKAV 65
>UniRef50_Q5YES7 Cluster: Splicing factor; n=1; Bigelowiella
natans|Rep: Splicing factor - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 194
Score = 42.3 bits (95), Expect = 0.005
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +3
Query: 168 GKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
GK+ + W+A NPPGF F+ FE+ +A+DA+
Sbjct: 35 GKIVATWIARNPPGFGFVTFEDPYDAKDAI 64
>UniRef50_Q5DDS2 Cluster: SJCHGC01826 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01826 protein - Schistosoma
japonicum (Blood fluke)
Length = 220
Score = 41.5 bits (93), Expect = 0.009
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+K G++ VWVA NPPGFAF E+ +AE AV
Sbjct: 31 SKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAV 63
Score = 36.7 bits (81), Expect = 0.26
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 98 RVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNGTE 277
++Y+GGLVE + KEDL RE + + P F F + + + +++G
Sbjct: 11 KLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVN 70
Query: 278 MLGATLKVEIS 310
+ G+ ++VE +
Sbjct: 71 VCGSRIRVEFA 81
>UniRef50_Q4UCK9 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 146
Score = 41.1 bits (92), Expect = 0.012
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENL 236
+KYGK+ +VWVA NPPGF F+ NL
Sbjct: 32 SKYGKVTNVWVARNPPGFGFVVCYNL 57
>UniRef50_Q15ET7 Cluster: Alternative splicing factor SRp20/9G8-like
protein; n=1; Schistosoma mansoni|Rep: Alternative
splicing factor SRp20/9G8-like protein - Schistosoma
mansoni (Blood fluke)
Length = 245
Score = 38.3 bits (85), Expect = 0.084
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 168 GKLNSVWVALNPPGFAFIEFENLQEAEDAVAR 263
G + VWVA NPP FAFI F+ ++A+ AV R
Sbjct: 44 GPIADVWVARNPPVFAFIVFKYAEDADRAVRR 75
>UniRef50_O18219 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 121
Score = 38.3 bits (85), Expect = 0.084
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 168 GKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
G + S+W+A PPGFAF+ F+ A DAV
Sbjct: 52 GPIKSIWMAKRPPGFAFVTFKRTVHAFDAV 81
>UniRef50_P26686-8 Cluster: Isoform I of P26686 ; n=1; Drosophila
melanogaster|Rep: Isoform I of P26686 - Drosophila
melanogaster (Fruit fly)
Length = 171
Score = 37.5 bits (83), Expect = 0.15
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>UniRef50_Q54Q30 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 293
Score = 37.1 bits (82), Expect = 0.19
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 77 TMSSGGTRVYVGGLVEGIKKEDLER---EFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGG 247
T ++ R++VG L E ++ LE EF + ++ KS F F + +L
Sbjct: 11 TPTTPAHRIFVGNLTENVESSTLETAFAEFGKVLSVRIIKKKFKSNTFGFVDMEDLETAN 70
Query: 248 RCGSAMNGTEMLGATLKVEISRK 316
+ +A+NG E G + VEI+R+
Sbjct: 71 KAVAAINGREFDGKQVNVEIARE 93
>UniRef50_A2WP42 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 431
Score = 35.9 bits (79), Expect = 0.45
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVAL--NPPGFAFIEFENLQEAEDAV 257
KYG++ + + + PPG+AF+EFE+ ++A+DA+
Sbjct: 202 KYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAI 235
>UniRef50_O81290 Cluster: T14P8.21; n=1; Arabidopsis thaliana|Rep:
T14P8.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 294
Score = 35.5 bits (78), Expect = 0.59
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = +3
Query: 159 NKYGKLNSVWVAL--NPPGFAFIEFENLQEAEDAV 257
+KYG + + + + PPG+AF+EFE+ ++A+DA+
Sbjct: 28 SKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAI 62
>UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidopsis
thaliana|Rep: Putative splicing factor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 561
Score = 35.1 bits (77), Expect = 0.78
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEA 245
+K+GKLN ++V N GF ++ FEN Q A
Sbjct: 496 SKFGKLNHIFVDKNSVGFVYLRFENAQAA 524
>UniRef50_Q98RZ7 Cluster: Polyadenylate-binding protein; n=1;
Guillardia theta|Rep: Polyadenylate-binding protein -
Guillardia theta (Cryptomonas phi)
Length = 389
Score = 34.3 bits (75), Expect = 1.4
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 4/35 (11%)
Frame = +3
Query: 165 YGKLNSVWVAL----NPPGFAFIEFENLQEAEDAV 257
+GK+ S+++ L P GFA+I FEN ++AE+A+
Sbjct: 210 FGKITSIFIPLWYNSIPKGFAYINFENHEDAEEAI 244
>UniRef50_A0BVN1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 517
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPG---FAFIEFENLQEAEDAV 257
++YGK+ S+ V +NP FAF+ FEN ++A AV
Sbjct: 191 SEYGKIESIQVNVNPKNQTYFAFVRFENSEDAYKAV 226
>UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to FUSIP1 protein, partial -
Ornithorhynchus anatinus
Length = 224
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 113 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 149
>UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1; n=1;
Macaca mulatta|Rep: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1 - Macaca
mulatta
Length = 465
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 400 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 436
>UniRef50_Q91BI2 Cluster: Baculovirus J domain protein; n=2;
Spodoptera litura NPV|Rep: Baculovirus J domain protein
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 33.5 bits (73), Expect = 2.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
KYGK+ ++ + N PG A +EF + AEDA+
Sbjct: 208 KYGKIIAMVMCSNRPGCAIVEFATRKSAEDAI 239
>UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich
protein 1; n=55; Tetrapoda|Rep: FUS-interacting
serine-arginine-rich protein 1 - Homo sapiens (Human)
Length = 262
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>UniRef50_Q2BKK5 Cluster: Putative uncharacterized protein; n=1;
Neptuniibacter caesariensis|Rep: Putative
uncharacterized protein - Neptuniibacter caesariensis
Length = 74
Score = 33.1 bits (72), Expect = 3.2
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -1
Query: 307 DLYFQSGA*HLSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFELAFEIFLLD 128
D +F+ +L IHR T S ++K K + +F+ P EL E+FLLD
Sbjct: 6 DAWFERENPYLKVIHRKTGISVLNWQGETLKRKILNGAINVEDFNQPPSQELVKELFLLD 65
Query: 127 SLDE 116
LD+
Sbjct: 66 CLDQ 69
>UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18;
Euteleostomi|Rep: 35 kDa SR repressor protein - Homo
sapiens (Human)
Length = 261
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V++ L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>UniRef50_Q95JS6 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 171
Score = 32.7 bits (71), Expect = 4.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 306 SLESGTGPAEVGSEVGAAVTSGVVVHSEVR 395
SL SGTG +VG++ GA T G + HS +R
Sbjct: 41 SLRSGTGRQQVGAQPGALPTRGSLSHSRLR 70
>UniRef50_Q2J9J4 Cluster: Rieske (2Fe-2S) protein; n=1; Frankia sp.
CcI3|Rep: Rieske (2Fe-2S) protein - Frankia sp. (strain
CcI3)
Length = 356
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 352 GRR*LQGWSFIRRSGRRXVQQLI 420
GR LQGWS IRR+G R + LI
Sbjct: 274 GRTVLQGWSLIRRTGNRALDHLI 296
>UniRef50_Q9XVK6 Cluster: Putative uncharacterized protein wve-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein wve-1 - Caenorhabditis elegans
Length = 468
Score = 32.3 bits (70), Expect = 5.5
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = -2
Query: 285 PNISVPFIALPHLPPPASSQIL*KRNLGDL------VLPKLSLVFHIYSNSRSRSSFLIP 124
P + P + L HLPPP S + + DL +L S+V + + + S F+ P
Sbjct: 290 PTEAPPPVNLDHLPPPDMSILSIDDDDDDLPPPPPPLLMNTSIVHQLPAEAPSTIQFVEP 349
Query: 123 STRPPTYTRVPP 88
S PPT PP
Sbjct: 350 SAAPPTNIPPPP 361
>UniRef50_Q10021 Cluster: Probable splicing factor,
arginine/serine-rich 5; n=4; Caenorhabditis|Rep:
Probable splicing factor, arginine/serine-rich 5 -
Caenorhabditis elegans
Length = 208
Score = 32.3 bits (70), Expect = 5.5
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
YGK+N++ + GFAF++FE+ ++AEDA
Sbjct: 25 YGKINNISMKY---GFAFVDFEDSRDAEDA 51
>UniRef50_A3ESJ7 Cluster: Putative signal transduction protein; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative signal
transduction protein - Leptospirillum sp. Group II UBA
Length = 1156
Score = 31.9 bits (69), Expect = 7.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 316 AGRAPQRWVQRSGR-R*LQGWSFIRRSGRR 402
AG +P RW+ R R L+ WS +RR GRR
Sbjct: 51 AGLSPARWLDEETRNRLLETWSSMRRKGRR 80
>UniRef50_Q5KAK6 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 830
Score = 31.9 bits (69), Expect = 7.3
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 319 PLSRDLYFQSGA*HLSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLF-ELAFE 143
P + D +F S HLS+ AS A C F S P F + T FS +F LAFE
Sbjct: 594 PKATDYHFSSMDGHLSSSPDDPASGAQCTFHFS-TCLPANFFDSSTSFSASSMFTRLAFE 652
>UniRef50_UPI0000E47584 Cluster: PREDICTED: similar to Nuclear
receptor coactivator 5; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Nuclear receptor
coactivator 5 - Strongylocentrotus purpuratus
Length = 838
Score = 31.5 bits (68), Expect = 9.7
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
KYG++++ ++ GFAFI+F + QEA+DA+
Sbjct: 34 KYGRISNTFMK---KGFAFIQFGSPQEAQDAI 62
>UniRef50_Q9FIB8 Cluster: Splicing factor-like protein; n=12;
Magnoliophyta|Rep: Splicing factor-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 604
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLR 278
+KYG +N ++V N GF ++ F+++ EA A R M +R
Sbjct: 466 SKYGPVNHIYVDKNSAGFVYLRFQSV-EAAAAAQRAMHMR 504
>UniRef50_A7P8E1 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 577
Score = 31.5 bits (68), Expect = 9.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
+K+G + ++V N GF F+ FEN Q A A
Sbjct: 514 SKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 545
>UniRef50_Q56UE6 Cluster: Splicing factor-like protein; n=1; Lymnaea
stagnalis|Rep: Splicing factor-like protein - Lymnaea
stagnalis (Great pond snail)
Length = 194
Score = 31.5 bits (68), Expect = 9.7
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREF 157
GG RVYVG + + I + DLEREF
Sbjct: 40 GGFRVYVGDIGQRIGRTDLEREF 62
>UniRef50_Q55ED3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1235
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 NKYGKL-NSVWVALNPPG-FAFIEFENLQEAEDA 254
+KYGK+ N V +P G +AF+E+E L++A++A
Sbjct: 48 SKYGKIKNHSIVETHPKGPYAFVEYETLEQADEA 81
>UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein rsd1
- Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 123 RESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+E + + KYGK+ + V N G F++FEN AE A+
Sbjct: 527 QELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAI 571
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,838,222
Number of Sequences: 1657284
Number of extensions: 6288178
Number of successful extensions: 18395
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 17821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18376
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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