Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0576
(472 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 48 3e-06
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 48 5e-06
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 47 7e-06
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 36 0.016
03_02_0967 + 12786219-12786305,12786716-12786781,12786897-127869... 36 0.022
09_06_0056 - 20561645-20561920,20562024-20562611,20562698-205630... 32 0.20
09_06_0055 - 20550889-20551531,20551612-20551889,20552035-205522... 31 0.35
06_03_1369 + 29620958-29621030,29622421-29622452,29622538-296225... 31 0.47
02_04_0452 + 23044190-23045227 30 0.82
12_02_0350 + 17826907-17827041,17828018-17828070,17828305-178284... 29 1.9
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 28 4.4
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 28 4.4
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 27 5.8
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 27 5.8
04_03_0997 - 21548158-21548377,21548482-21548523,21548646-215487... 27 5.8
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 27 7.6
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 27 7.6
05_06_0160 - 26073245-26073376,26073546-26073643,26073735-260739... 27 7.6
04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571 27 7.6
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G L SVWVA PPGFAFI+F++ ++AEDA+
Sbjct: 25 FGVLRSVWVARKPPGFAFIDFDDRRDAEDAI 55
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 47.6 bits (108), Expect = 5e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G L SVWVA PPGFAFI+F++ ++AEDA+
Sbjct: 25 FGVLRSVWVARKPPGFAFIDFDDKRDAEDAL 55
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 47.2 bits (107), Expect = 7e-06
Identities = 18/31 (58%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
+G L SVWVA PPGFAFI+F++ ++A+DA+
Sbjct: 25 FGVLRSVWVARKPPGFAFIDFDDRRDAQDAI 55
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 35.9 bits (79), Expect = 0.016
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVAL--NPPGFAFIEFENLQEAEDAV 257
KYG++ + + + PPG+AF+EFE+ ++A+DA+
Sbjct: 29 KYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAI 62
>03_02_0967 +
12786219-12786305,12786716-12786781,12786897-12786971,
12787054-12787162,12787253-12787299,12787396-12787453,
12788193-12788242,12788459-12788504,12788758-12788808,
12789376-12789478,12789923-12789956,12790210-12790224
Length = 246
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 KYGKLNSVWVAL--NPPGFAFIEFENLQEAEDAVA 260
KYG++ + + + PPG+AF+EFE+ ++AE+A A
Sbjct: 29 KYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACA 63
>09_06_0056 -
20561645-20561920,20562024-20562611,20562698-20563055,
20563149-20563483,20563593-20563633,20563722-20563932,
20564289-20564348,20564432-20564457,20565066-20565264
Length = 697
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 93 VLACTSAVSSRESRRKISNASSNK--YGKLNSVWVALNPPGFAFIEFENLQE 242
V+ ++ ++++E + + + ++K +G +N +W LNPPG A I EN+ E
Sbjct: 400 VVVNSTIMNAKEPEKHVFHLVTDKLNFGAMN-MWFLLNPPGKATIHVENVDE 450
>09_06_0055 -
20550889-20551531,20551612-20551889,20552035-20552203,
20552397-20552534,20553945-20553997,20554521-20554574,
20556062-20556295,20556399-20556986,20557065-20557419,
20557494-20557694,20557925-20557998,20558114-20558254,
20558611-20558670,20558750-20558806,20559281-20559318,
20559419-20559578
Length = 1080
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +3
Query: 105 TSAVSSRESRRKISNASSNK--YGKLNSVWVALNPPGFAFIEFENLQE 242
++ ++++E + + + ++K +G +N +W LNPPG A I EN+ E
Sbjct: 356 STIMNAKEPEKHVFHLVTDKLNFGAMN-MWFLLNPPGKATIHVENVDE 402
>06_03_1369 +
29620958-29621030,29622421-29622452,29622538-29622598,
29622695-29622711,29622916-29623250,29623329-29623686,
29623784-29624371,29624664-29624939
Length = 579
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 93 VLACTSAVSSRESRRKISNASSNK--YGKLNSVWVALNPPGFAFIEFENLQE 242
V+ ++ ++++E + + + ++K +G +N +W LNPPG A I EN+ +
Sbjct: 282 VVVNSTIMNAKEPEKHVFHLVTDKLNFGAMN-MWFLLNPPGDATIHVENVDD 332
>02_04_0452 + 23044190-23045227
Length = 345
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 168 HIYSNSRSRSSFLIPSTRPPTYTRVPP 88
H +S+S S S PSTRPPT PP
Sbjct: 180 HAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>12_02_0350 +
17826907-17827041,17828018-17828070,17828305-17828414,
17828629-17828796,17828898-17829155,17829295-17829395
Length = 274
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 207 LGDLVLPKLSLVFHIYSNSRSRSSFLIPSTRPPTYTRV 94
LG+L + K LV HIYS+S+ S+ + P + V
Sbjct: 128 LGELFIKKTPLVRHIYSSSKQISAAISPDQSSRAFKEV 165
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +3
Query: 126 ESRRKISNASSNKY--GKLNSVWVALN 200
+SRRK+ NA NKY G+LNS + N
Sbjct: 791 DSRRKLCNACGNKYRSGQLNSTTFSQN 817
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 101 VYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNGTEM 280
++VGG+ I KE+LE EF+ K + ++ + +L A+NG +
Sbjct: 126 LWVGGISSSISKEELEEEFKKFGKVD-GIAFSRDQTSAYIDFDKLEDAISAHRALNGRVL 184
Query: 281 LGATLKVEISR 313
G L V+ R
Sbjct: 185 GGQELCVDFQR 195
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 282 NISVPFIALPHLPPPASSQIL*KRNLGDLVL 190
N S I LPH+P A S +L ++NL DL +
Sbjct: 484 NGSDEIIELPHVPDSAPSCLLPRKNLFDLAV 514
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
+K+G +N ++V N GF ++ F+++ A A
Sbjct: 488 SKFGAVNHIFVDKNTAGFVYLHFDSVAAATAA 519
>04_03_0997 -
21548158-21548377,21548482-21548523,21548646-21548722,
21548798-21548914,21549149-21549252,21549330-21549399,
21549489-21549598,21549845-21549932,21550006-21550096,
21550176-21550268,21550362-21550687,21550922-21551290,
21551934-21552020
Length = 597
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 198 LVLPKLSLVFHIYSNSRSRSSFLIPSTRPPTYTRVPPEL 82
L L +++ IYS SRS ++ P+TR Y +PP +
Sbjct: 432 LALHYANIIIQIYSVV-SRSGYIPPNTRDALYQGLPPRV 469
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLER 151
G+ VYVGG+ + EDL+R
Sbjct: 110 GSEVYVGGISSDVSSEDLKR 129
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLER 151
G+ VYVGG+ + EDL+R
Sbjct: 518 GSEVYVGGISSDVSSEDLKR 537
>05_06_0160 -
26073245-26073376,26073546-26073643,26073735-26073902,
26074707-26074856,26075589-26075610,26075775-26075942
Length = 245
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 210 NLGDLVLPKLSLVFHIYSNSRSRSSFLIPSTRPPTYTRV 94
+LG+ ++ ++ LV HIY+ S+ S+ + P + V
Sbjct: 141 SLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEV 179
>04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571
Length = 740
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 171 FHIYSNSRSRSSFLIPSTRPP 109
FH++ +SRS S FLI S+ P
Sbjct: 149 FHVHDSSRSCSKFLIASSSDP 169
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,063,243
Number of Sequences: 37544
Number of extensions: 183310
Number of successful extensions: 636
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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