Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0576
         (472 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   1.8  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   4.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   9.4  
AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodi...    22   9.4  
AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodi...    22   9.4  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 291 VAPNISVPFIALPHLPPPASS 229
           ++ N   P+ ALP  PPPA S
Sbjct: 223 ISSNPQSPYGALPETPPPAYS 243


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 103 HASTTRTHGLV*KKNRMFKYENNELTLN 20
           +A+ +R H L+ ++ R+F+  NN+   N
Sbjct: 722 YAAASREHDLLEQRIRLFEERNNDREAN 749


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 80  MSSGGTRVYVGGLVEGIKKE--DLERE 154
           +  GG  V   G+VEG  K+  D+ERE
Sbjct: 798 LEGGGKMVLQEGVVEGGTKDETDMERE 824


>AY825864-1|AAV70427.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 14/80 (17%), Positives = 30/80 (37%)
 Frame = +3

Query: 18  SFKVNSLFSYLNIRFFF*TKP*VRVVLACTSAVSSRESRRKISNASSNKYGKLNSVWVAL 197
           +  +  L +YL I F       + V+L   S  +           + + Y     +W   
Sbjct: 13  TISITYLLAYLVISFLIVINMYIAVILENYSQATEDVQE----GLTDDDYDMYYEIWQQF 68

Query: 198 NPPGFAFIEFENLQEAEDAV 257
           +P G  ++ ++ L +  D +
Sbjct: 69  DPDGTQYVRYDQLSDFLDVL 88


>AY825863-1|AAV70426.1|  161|Anopheles gambiae voltage gated sodium
           channel protein.
          Length = 161

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 14/80 (17%), Positives = 30/80 (37%)
 Frame = +3

Query: 18  SFKVNSLFSYLNIRFFF*TKP*VRVVLACTSAVSSRESRRKISNASSNKYGKLNSVWVAL 197
           +  +  L +YL I F       + V+L   S  +           + + Y     +W   
Sbjct: 13  TISITYLLAYLVISFLIVINMYIAVILENYSQATEDVQE----GLTDDDYDMYYEIWQQF 68

Query: 198 NPPGFAFIEFENLQEAEDAV 257
           +P G  ++ ++ L +  D +
Sbjct: 69  DPDGTQYVRYDQLSDFLDVL 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,953
Number of Sequences: 2352
Number of extensions: 6719
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)