Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0576
(472 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 53 4e-07
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 53 4e-07
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 53 4e-07
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 53 4e-07
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 53 4e-07
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 53 4e-07
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 53 4e-07
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 53 4e-07
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 53 4e-07
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 53 4e-07
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 52 8e-07
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 52 8e-07
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 52 8e-07
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 52 8e-07
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 52 8e-07
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 52 8e-07
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 50 4e-06
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 33 0.38
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 33 0.38
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 33 0.38
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 33 0.38
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 33 0.38
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 33 0.38
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 33 0.38
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 33 0.38
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 33 0.38
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 33 0.38
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 33 0.38
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 33 0.38
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 33 0.38
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 33 0.38
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 33 0.38
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 33 0.38
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 33 0.38
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 33 0.38
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 33 0.38
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 33 0.38
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 33 0.50
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 31 1.5
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 30 3.5
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 30 3.5
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 30 3.5
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 30 3.5
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 30 3.5
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 30 3.5
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 30 3.5
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 30 4.6
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 30 4.6
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 30 4.6
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 29 8.1
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 29 8.1
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 29 8.1
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 29 8.1
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 29 8.1
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 29 8.1
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 29 8.1
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 29 8.1
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 29 8.1
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 29 8.1
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 29 8.1
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 29 8.1
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 29 8.1
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 29 8.1
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 29 8.1
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 29 8.1
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 29 8.1
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 29 8.1
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 29 8.1
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 53.2 bits (122), Expect = 4e-07
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPPGFAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPGFAFVEFEDPRDAEDAV 64
Score = 32.3 bits (70), Expect = 0.87
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + P F F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 52.4 bits (120), Expect = 8e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVWVA NPPGFAF+EFE+ ++A DAV
Sbjct: 33 YGPLRSVWVARNPPGFAFVEFEDPRDAADAV 63
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L +VW+A NPP FAF+EFE+ ++AEDAV
Sbjct: 34 YGPLRTVWIARNPPRFAFVEFEDPRDAEDAV 64
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 89 GGTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMN 268
G T+VYVG L G K +LER F + + PRF F + ++
Sbjct: 9 GETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPRDAEDAVRGLD 68
Query: 269 GTEMLGATLKVEIS 310
G + G+ ++VE+S
Sbjct: 69 GKVICGSRVRVELS 82
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 33.5 bits (73), Expect = 0.38
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V+V L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 33.1 bits (72), Expect = 0.50
Identities = 14/37 (37%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V++ L+ P GFA+++FE++++AEDA+
Sbjct: 32 RYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 5/37 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAV 257
+YG + V++ L+ P GFA+++FE+++ AEDA+
Sbjct: 32 RYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDAL 68
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 70 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 103
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 162 KYGKLNSVWVA--LNPPGFAFIEFENLQEAEDAV 257
KYG + + + P FAF+EFE+ ++AEDAV
Sbjct: 38 KYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAV 71
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
KYG++ V++ P GFAF+ F + ++A+DA A
Sbjct: 36 KYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
KYG++ V++ P GFAF+ F + ++A+DA A
Sbjct: 26 KYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 63
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +3
Query: 162 KYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
KYG++ V++ P GFAF+ F + ++A+DA A
Sbjct: 36 KYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLNSVWVALNPP----GFAFIEFENLQEAEDA 254
+RE+ K+ A K+G ++ V + + GFAFI FEN +A++A
Sbjct: 16 NRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNA 64
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 231 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 267
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLNSVWVALNPP----GFAFIEFENLQEAEDA 254
+RE+ K+ A K+G ++ V + + GFAFI FEN +A++A
Sbjct: 16 NRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNA 64
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 249 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 285
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLNSVWVALNPP----GFAFIEFENLQEAEDA 254
+RE+ K+ A K+G ++ V + + GFAFI FEN +A++A
Sbjct: 16 NRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNA 64
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 206 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 242
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 206 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 242
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 189 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 225
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 268
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ46566 fis, clone THYMU3040829, moderately
similar to Cold-inducible RNA-binding protein. ).
Length = 135
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 232 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 268
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 246 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 282
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 165 YGKLNSVWVALNPP-----GFAFIEFENLQEAEDAVA 260
+GK+ S +A +P G+ FIE+E Q ++DAV+
Sbjct: 249 FGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVS 285
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Frame = +3
Query: 159 NKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAV 257
+KYG+++ V V + GF F+ FEN+ +A+DA+
Sbjct: 27 SKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,471,248
Number of Sequences: 237096
Number of extensions: 920480
Number of successful extensions: 2611
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2609
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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