BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0576 (472 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p pro... 60 2e-09 AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA... 60 2e-09 L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding pr... 59 3e-09 L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 58 8e-09 AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 58 8e-09 AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 58 8e-09 AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p pro... 57 1e-08 AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-P... 57 1e-08 AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-P... 57 1e-08 AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-P... 57 1e-08 AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-P... 57 1e-08 AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 53 2e-07 AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 53 2e-07 AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 53 2e-07 AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 53 2e-07 L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding pr... 50 1e-06 S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognitio... 42 4e-04 S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognitio... 40 0.002 X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 38 0.009 X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 38 0.009 BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 38 0.009 BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 38 0.009 AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 38 0.009 AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-P... 38 0.009 AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-P... 38 0.009 AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 38 0.009 AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 38 0.009 AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 38 0.009 AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 38 0.009 BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p pro... 35 0.048 AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 31 0.79 AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 31 0.79 AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 31 0.79 AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 31 0.79 BT025154-1|ABE73324.1| 375|Drosophila melanogaster IP03146p pro... 29 4.2 AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA... 29 4.2 AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p pro... 28 7.3 AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick pro... 28 7.3 AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA,... 28 7.3 X97447-1|CAA66076.1| 878|Drosophila melanogaster Dos protein pr... 27 9.7 AY122244-1|AAM52756.1| 798|Drosophila melanogaster SD02517p pro... 27 9.7 AE014296-479|AAF47663.2| 798|Drosophila melanogaster CG1044-PB,... 27 9.7 AE014296-478|AAF47662.1| 878|Drosophila melanogaster CG1044-PA,... 27 9.7 >AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p protein. Length = 158 Score = 59.7 bits (138), Expect = 2e-09 Identities = 28/47 (59%), Positives = 36/47 (76%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254 + S S+ +I NA S KYG L +VWVA NPPGFAF+EFE+ ++AEDA Sbjct: 18 LGSSASKYEIENAFS-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDA 63 >AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA protein. Length = 158 Score = 59.7 bits (138), Expect = 2e-09 Identities = 28/47 (59%), Positives = 36/47 (76%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254 + S S+ +I NA S KYG L +VWVA NPPGFAF+EFE+ ++AEDA Sbjct: 18 LGSSASKYEIENAFS-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDA 63 >L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding protein protein. Length = 135 Score = 59.3 bits (137), Expect = 3e-09 Identities = 29/56 (51%), Positives = 38/56 (67%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA A RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDGTRC 72 >L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding protein protein. Length = 197 Score = 57.6 bits (133), Expect = 8e-09 Identities = 23/31 (74%), Positives = 27/31 (87%) Frame = +3 Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254 KYGKLNSVW+A NPPGFAF+EFE+ +AE A Sbjct: 29 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 59 Score = 52.8 bits (121), Expect = 2e-07 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 GTRVYVG L + +KK+DLE EF K + P F F + +NG Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 65 Query: 272 TEMLGATLKVEISR 313 +E+LG+ L+VEIS+ Sbjct: 66 SELLGSQLRVEISK 79 >AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p protein. Length = 200 Score = 57.6 bits (133), Expect = 8e-09 Identities = 23/31 (74%), Positives = 27/31 (87%) Frame = +3 Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254 KYGKLNSVW+A NPPGFAF+EFE+ +AE A Sbjct: 32 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 62 Score = 52.8 bits (121), Expect = 2e-07 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 GTRVYVG L + +KK+DLE EF K + P F F + +NG Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 68 Query: 272 TEMLGATLKVEISR 313 +E+LG+ L+VEIS+ Sbjct: 69 SELLGSQLRVEISK 82 >AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA protein. Length = 200 Score = 57.6 bits (133), Expect = 8e-09 Identities = 23/31 (74%), Positives = 27/31 (87%) Frame = +3 Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254 KYGKLNSVW+A NPPGFAF+EFE+ +AE A Sbjct: 32 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 62 Score = 52.8 bits (121), Expect = 2e-07 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 GTRVYVG L + +KK+DLE EF K + P F F + +NG Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 68 Query: 272 TEMLGATLKVEISR 313 +E+LG+ L+VEIS+ Sbjct: 69 SELLGSQLRVEISK 82 >AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p protein. Length = 144 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72 >AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-PB, isoform B protein. Length = 106 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72 >AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-PD, isoform D protein. Length = 144 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72 >AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-PC, isoform C protein. Length = 135 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72 >AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-PA, isoform A protein. Length = 135 Score = 57.2 bits (132), Expect = 1e-08 Identities = 28/56 (50%), Positives = 37/56 (66%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281 + S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72 >AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p protein. Length = 258 Score = 53.2 bits (122), Expect = 2e-07 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +3 Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257 YG L SVW+A NPPGFAF+EFE+ ++A DAV Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61 >AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein protein. Length = 258 Score = 53.2 bits (122), Expect = 2e-07 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +3 Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257 YG L SVW+A NPPGFAF+EFE+ ++A DAV Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61 >AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family splicing factor 9G8 protein. Length = 258 Score = 53.2 bits (122), Expect = 2e-07 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +3 Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257 YG L SVW+A NPPGFAF+EFE+ ++A DAV Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61 >AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA protein. Length = 258 Score = 53.2 bits (122), Expect = 2e-07 Identities = 21/31 (67%), Positives = 26/31 (83%) Frame = +3 Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257 YG L SVW+A NPPGFAF+EFE+ ++A DAV Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61 >L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding protein protein. Length = 43 Score = 50.4 bits (115), Expect = 1e-06 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = +3 Query: 162 KYGKLNSVWVALNPPGFAFIEF 227 KYGKLNSVW+A NPPGFAF+EF Sbjct: 22 KYGKLNSVWIAFNPPGFAFVEF 43 Score = 31.9 bits (69), Expect = 0.45 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +2 Query: 98 RVYVGGLVEGIKKEDLEREF 157 RVYVG L + +KK+DLE EF Sbjct: 1 RVYVGNLTDKVKKDDLEGEF 20 >S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognition motif-type RNA-binding protein protein. Length = 39 Score = 41.9 bits (94), Expect = 4e-04 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFI 221 + S S+ +I A + KYG L +VWVA NPPGFAF+ Sbjct: 5 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFV 39 >S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognition motif-type RNA-binding protein protein. Length = 39 Score = 39.9 bits (89), Expect = 0.002 Identities = 18/36 (50%), Positives = 26/36 (72%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFI 221 ++ R S+ + +A + KYG L +VWVA NPPGFAF+ Sbjct: 5 LAPRRSKPRDRSAFA-KYGPLRNVWVARNPPGFAFV 39 >X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing protein protein. Length = 376 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-PF, isoform F protein. Length = 147 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-PD, isoform D protein. Length = 135 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB, isoform B protein. Length = 329 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE, isoform E protein. Length = 346 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC, isoform C protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA, isoform A protein. Length = 350 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +2 Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271 G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59 Query: 272 TEMLGATLKVEISR 313 E+LG + VE +R Sbjct: 60 KELLGERVVVEPAR 73 >BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p protein. Length = 187 Score = 35.1 bits (77), Expect = 0.048 Identities = 24/73 (32%), Positives = 37/73 (50%) Frame = +2 Query: 95 TRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNGT 274 +RVYVGGL G+++ DLER F+ +T+ L + F + +NG Sbjct: 1 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 57 Query: 275 EMLGATLKVEISR 313 E+LG + VE +R Sbjct: 58 ELLGERVVVEPAR 70 >AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p protein. Length = 255 Score = 31.1 bits (67), Expect = 0.79 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257 +K+GK+ V + P FAF+EFE+ ++A+DAV Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61 >AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family splicing factor protein. Length = 255 Score = 31.1 bits (67), Expect = 0.79 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257 +K+GK+ V + P FAF+EFE+ ++A+DAV Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61 >AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family splicing factor SF2 protein. Length = 255 Score = 31.1 bits (67), Expect = 0.79 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257 +K+GK+ V + P FAF+EFE+ ++A+DAV Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61 >AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA protein. Length = 255 Score = 31.1 bits (67), Expect = 0.79 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +3 Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257 +K+GK+ V + P FAF+EFE+ ++A+DAV Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61 >BT025154-1|ABE73324.1| 375|Drosophila melanogaster IP03146p protein. Length = 375 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQ 239 V+ ++ R+ + + + YG L +WV L P FA +E E+LQ Sbjct: 63 VTDKDLMRRCAGKAFDLYGSLVRIWVLLF-PFFAVLEPEDLQ 103 >AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA protein. Length = 514 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQ 239 V+ ++ R+ + + + YG L +WV L P FA +E E+LQ Sbjct: 67 VTDKDLMRRCAGKAFDLYGSLVRIWVLLF-PFFAVLEPEDLQ 107 >AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p protein. Length = 695 Score = 27.9 bits (59), Expect = 7.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +3 Query: 120 SRESRRKISNASSNKYGKLN 179 S++SR I NASSNKY +N Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198 >AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick protein. Length = 701 Score = 27.9 bits (59), Expect = 7.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +3 Query: 120 SRESRRKISNASSNKYGKLN 179 S++SR I NASSNKY +N Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198 >AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA, isoform A protein. Length = 701 Score = 27.9 bits (59), Expect = 7.3 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +3 Query: 120 SRESRRKISNASSNKYGKLN 179 S++SR I NASSNKY +N Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198 >X97447-1|CAA66076.1| 878|Drosophila melanogaster Dos protein protein. Length = 878 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -1 Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152 +S H+ TAS+A+ S + A P +A QTE Y F+L Sbjct: 764 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 804 >AY122244-1|AAM52756.1| 798|Drosophila melanogaster SD02517p protein. Length = 798 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -1 Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152 +S H+ TAS+A+ S + A P +A QTE Y F+L Sbjct: 684 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 724 >AE014296-479|AAF47663.2| 798|Drosophila melanogaster CG1044-PB, isoform B protein. Length = 798 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -1 Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152 +S H+ TAS+A+ S + A P +A QTE Y F+L Sbjct: 684 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 724 >AE014296-478|AAF47662.1| 878|Drosophila melanogaster CG1044-PA, isoform A protein. Length = 878 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -1 Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152 +S H+ TAS+A+ S + A P +A QTE Y F+L Sbjct: 764 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 804 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,304,246 Number of Sequences: 53049 Number of extensions: 287877 Number of successful extensions: 1125 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 1037 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1110 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1601407269 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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