Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0576
(472 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p pro... 60 2e-09
AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA... 60 2e-09
L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding pr... 59 3e-09
L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 58 8e-09
AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 58 8e-09
AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 58 8e-09
AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p pro... 57 1e-08
AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-P... 57 1e-08
AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-P... 57 1e-08
AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-P... 57 1e-08
AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-P... 57 1e-08
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 53 2e-07
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 53 2e-07
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 53 2e-07
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 53 2e-07
L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding pr... 50 1e-06
S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognitio... 42 4e-04
S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognitio... 40 0.002
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 38 0.009
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 38 0.009
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 38 0.009
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 38 0.009
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 38 0.009
AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-P... 38 0.009
AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-P... 38 0.009
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 38 0.009
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 38 0.009
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 38 0.009
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 38 0.009
BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p pro... 35 0.048
AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p pro... 31 0.79
AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family sp... 31 0.79
AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family sp... 31 0.79
AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA... 31 0.79
BT025154-1|ABE73324.1| 375|Drosophila melanogaster IP03146p pro... 29 4.2
AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA... 29 4.2
AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p pro... 28 7.3
AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick pro... 28 7.3
AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA,... 28 7.3
X97447-1|CAA66076.1| 878|Drosophila melanogaster Dos protein pr... 27 9.7
AY122244-1|AAM52756.1| 798|Drosophila melanogaster SD02517p pro... 27 9.7
AE014296-479|AAF47663.2| 798|Drosophila melanogaster CG1044-PB,... 27 9.7
AE014296-478|AAF47662.1| 878|Drosophila melanogaster CG1044-PA,... 27 9.7
>AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p
protein.
Length = 158
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
+ S S+ +I NA S KYG L +VWVA NPPGFAF+EFE+ ++AEDA
Sbjct: 18 LGSSASKYEIENAFS-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDA 63
>AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA
protein.
Length = 158
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
+ S S+ +I NA S KYG L +VWVA NPPGFAF+EFE+ ++AEDA
Sbjct: 18 LGSSASKYEIENAFS-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDA 63
>L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding
protein protein.
Length = 135
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA A RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDGTRC 72
>L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding
protein protein.
Length = 197
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
KYGKLNSVW+A NPPGFAF+EFE+ +AE A
Sbjct: 29 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 59
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
GTRVYVG L + +KK+DLE EF K + P F F + +NG
Sbjct: 6 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 65
Query: 272 TEMLGATLKVEISR 313
+E+LG+ L+VEIS+
Sbjct: 66 SELLGSQLRVEISK 79
>AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p
protein.
Length = 200
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
KYGKLNSVW+A NPPGFAF+EFE+ +AE A
Sbjct: 32 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 62
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
GTRVYVG L + +KK+DLE EF K + P F F + +NG
Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 68
Query: 272 TEMLGATLKVEISR 313
+E+LG+ L+VEIS+
Sbjct: 69 SELLGSQLRVEISK 82
>AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA
protein.
Length = 200
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEFENLQEAEDA 254
KYGKLNSVW+A NPPGFAF+EFE+ +AE A
Sbjct: 32 KYGKLNSVWIAFNPPGFAFVEFEHRDDAEKA 62
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
GTRVYVG L + +KK+DLE EF K + P F F + +NG
Sbjct: 9 GTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNG 68
Query: 272 TEMLGATLKVEISR 313
+E+LG+ L+VEIS+
Sbjct: 69 SELLGSQLRVEISK 82
>AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p
protein.
Length = 144
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-PB,
isoform B protein.
Length = 106
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-PD,
isoform D protein.
Length = 144
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-PC,
isoform C protein.
Length = 135
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-PA,
isoform A protein.
Length = 135
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQEAEDAVAR*MVLRC 281
+ S S+ +I A + KYG L +VWVA NPPGFAF+EFE+ ++AEDA RC
Sbjct: 18 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRC 72
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVW+A NPPGFAF+EFE+ ++A DAV
Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVW+A NPPGFAF+EFE+ ++A DAV
Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVW+A NPPGFAF+EFE+ ++A DAV
Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +3
Query: 165 YGKLNSVWVALNPPGFAFIEFENLQEAEDAV 257
YG L SVW+A NPPGFAF+EFE+ ++A DAV
Sbjct: 31 YGSLRSVWIARNPPGFAFVEFESARDAADAV 61
>L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding
protein protein.
Length = 43
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 162 KYGKLNSVWVALNPPGFAFIEF 227
KYGKLNSVW+A NPPGFAF+EF
Sbjct: 22 KYGKLNSVWIAFNPPGFAFVEF 43
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 98 RVYVGGLVEGIKKEDLEREF 157
RVYVG L + +KK+DLE EF
Sbjct: 1 RVYVGNLTDKVKKDDLEGEF 20
>S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 39
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFI 221
+ S S+ +I A + KYG L +VWVA NPPGFAF+
Sbjct: 5 LGSSASKHEIEGAFA-KYGPLRNVWVARNPPGFAFV 39
>S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 39
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFI 221
++ R S+ + +A + KYG L +VWVA NPPGFAF+
Sbjct: 5 LAPRRSKPRDRSAFA-KYGPLRNVWVARNPPGFAFV 39
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-PF,
isoform F protein.
Length = 147
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-PD,
isoform D protein.
Length = 135
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 92 GTRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNG 271
G+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 3 GSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNG 59
Query: 272 TEMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 60 KELLGERVVVEPAR 73
>BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p
protein.
Length = 187
Score = 35.1 bits (77), Expect = 0.048
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 95 TRVYVGGLVEGIKKEDLEREFE*IWKTKLSLGSTKSPRFRFHRI*ELAGGGRCGSAMNGT 274
+RVYVGGL G+++ DLER F+ +T+ L + F + +NG
Sbjct: 1 SRVYVGGLPYGVRERDLERFFKGYGRTRDILIKN---GYGFVEFEDYRDADDAVYELNGK 57
Query: 275 EMLGATLKVEISR 313
E+LG + VE +R
Sbjct: 58 ELLGERVVVEPAR 70
>AY051919-1|AAK93343.1| 255|Drosophila melanogaster LD40489p
protein.
Length = 255
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257
+K+GK+ V + P FAF+EFE+ ++A+DAV
Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61
>AF234157-1|AAF60294.1| 255|Drosophila melanogaster SR family
splicing factor protein.
Length = 255
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257
+K+GK+ V + P FAF+EFE+ ++A+DAV
Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61
>AF232773-1|AAF43413.1| 255|Drosophila melanogaster SR family
splicing factor SF2 protein.
Length = 255
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257
+K+GK+ V + P FAF+EFE+ ++A+DAV
Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61
>AE014297-2188|AAF55300.1| 255|Drosophila melanogaster CG6987-PA
protein.
Length = 255
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 NKYGKLNSVWVA-LNPPGFAFIEFENLQEAEDAV 257
+K+GK+ V + P FAF+EFE+ ++A+DAV
Sbjct: 28 HKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAV 61
>BT025154-1|ABE73324.1| 375|Drosophila melanogaster IP03146p
protein.
Length = 375
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQ 239
V+ ++ R+ + + + YG L +WV L P FA +E E+LQ
Sbjct: 63 VTDKDLMRRCAGKAFDLYGSLVRIWVLLF-PFFAVLEPEDLQ 103
>AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA
protein.
Length = 514
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 114 VSSRESRRKISNASSNKYGKLNSVWVALNPPGFAFIEFENLQ 239
V+ ++ R+ + + + YG L +WV L P FA +E E+LQ
Sbjct: 67 VTDKDLMRRCAGKAFDLYGSLVRIWVLLF-PFFAVLEPEDLQ 107
>AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p
protein.
Length = 695
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLN 179
S++SR I NASSNKY +N
Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198
>AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick
protein.
Length = 701
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLN 179
S++SR I NASSNKY +N
Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198
>AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA,
isoform A protein.
Length = 701
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 120 SRESRRKISNASSNKYGKLN 179
S++SR I NASSNKY +N
Sbjct: 179 SKQSRDSIYNASSNKYSLIN 198
>X97447-1|CAA66076.1| 878|Drosophila melanogaster Dos protein
protein.
Length = 878
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152
+S H+ TAS+A+ S + A P +A QTE Y F+L
Sbjct: 764 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 804
>AY122244-1|AAM52756.1| 798|Drosophila melanogaster SD02517p
protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152
+S H+ TAS+A+ S + A P +A QTE Y F+L
Sbjct: 684 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 724
>AE014296-479|AAF47663.2| 798|Drosophila melanogaster CG1044-PB,
isoform B protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152
+S H+ TAS+A+ S + A P +A QTE Y F+L
Sbjct: 684 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 724
>AE014296-478|AAF47662.1| 878|Drosophila melanogaster CG1044-PA,
isoform A protein.
Length = 878
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 277 LSTIHRATASSASCKFSNSMKAKPGGFSATQTEFSFPYLFEL 152
+S H+ TAS+A+ S + A P +A QTE Y F+L
Sbjct: 764 MSVQHQRTASAAAAMMSLTAAAAPKQQAAAQTEHKLQY-FDL 804
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,304,246
Number of Sequences: 53049
Number of extensions: 287877
Number of successful extensions: 1125
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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