Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0575
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   2.2  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.2  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   6.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 82  TALMTCHVHLCPSLFI 129
           T   TCH HL PSL I
Sbjct: 96  TTTSTCHSHLLPSLAI 111


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 82  TALMTCHVHLCPSLFI 129
           T   TCH HL PSL I
Sbjct: 96  TTTSTCHSHLLPSLAI 111


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 27  GAEKRSNMHASAIHISKTDCTNDLPCSFV 113
           G EKRS+M ++   +    C N   C F+
Sbjct: 179 GCEKRSDMASTDFWLITAYCENGSLCDFL 207


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = -1

Query: 520 SFWPTIFILDSVTESFVATLTALEIICQPLC*IFPQQSTQ*LSNSHLSNYYVEALIYI 347
           SF+     +D   +SF A LT+  + C P   IF        SN  L N   + + Y+
Sbjct: 297 SFFYQCTSVDEAVQSFNALLTSALLSCTP---IFRSPPNPPWSNRTLRNLKKDRMKYL 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,052
Number of Sequences: 2352
Number of extensions: 9219
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)