Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0574
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349... 36 0.038
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 34 0.088
07_01_0446 - 3371829-3372132,3374691-3375673 32 0.36
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 32 0.47
08_02_1085 + 24237804-24238403 31 1.1
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 31 1.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.4
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 30 1.4
08_02_1212 - 25325911-25327047 30 1.4
04_03_0991 - 21500143-21500799,21500834-21501172 30 1.4
03_02_0294 + 7176906-7177532 30 1.4
12_02_1009 + 25268666-25269295 30 1.9
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 30 1.9
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264... 29 2.5
03_05_0267 - 22538631-22539452 29 2.5
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 3.3
09_02_0543 + 10427321-10428315,10428440-10429154 29 3.3
08_02_1351 + 26318023-26318665,26319386-26319543,26320843-263209... 29 3.3
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350 29 3.3
07_03_1330 + 25848372-25849157 29 3.3
06_03_0969 - 26413534-26413594,26415020-26415318 29 3.3
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646 29 3.3
01_06_0044 - 25922298-25923434 29 3.3
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 4.4
07_03_1568 - 27788314-27788619,27789125-27789294,27789868-277899... 29 4.4
05_02_0006 - 5541290-5541961 29 4.4
03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867... 29 4.4
02_02_0343 + 9163976-9165220 29 4.4
11_01_0098 - 724413-724449,725200-725690 28 5.8
08_02_1213 - 25329775-25330227 28 5.8
07_03_1160 - 24430240-24431268 28 5.8
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 5.8
03_03_0217 + 15500943-15502196 28 5.8
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 28 5.8
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 28 7.7
11_01_0066 - 536281-537196,537397-537452 28 7.7
09_04_0249 + 16070331-16070828 28 7.7
09_04_0112 - 14757947-14758972 28 7.7
04_03_1022 - 21778315-21779007 28 7.7
>03_01_0455 +
3487354-3488090,3489172-3489255,3489942-3490554,
3491356-3491583,3492270-3492437,3492828-3494587,
3494667-3494670
Length = 1197
Score = 35.5 bits (78), Expect = 0.038
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +2
Query: 356 ARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR----SRRDSGTRLCYARLQEDT 523
ART P S A ST PAAA +RP A + R +RD GT A + + +
Sbjct: 38 ARTMPPPSSQAATSTPPAAATPLQRPPAQATAQPSTQRYYVGVQRDKGTGKWAACVVDPS 97
Query: 524 SPVSH 538
+P H
Sbjct: 98 NPTKH 102
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 34.3 bits (75), Expect = 0.088
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 374 ARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVTDNE 553
A SA QST +A+ RR STS H ++ SR + +A + E S +H + +E
Sbjct: 2049 ASGSAAQSTKQSASGQKRRSSTSEAEQHGSSTSRHNQ-----HAPVGE-VSGRAHTSKSE 2102
Query: 554 DDCRKDGP 577
D R GP
Sbjct: 2103 KDSRHSGP 2110
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 335 TGTRAHAARTYAPARSSARQSTAPAAACNARRPSTSA 445
TGT+ A T A RSSA Q + A C RRP++SA
Sbjct: 391 TGTQRSRAAT-AAVRSSAIQRSKATAVCTRRRPTSSA 426
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 163 PQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVES--RNLAACPCRLSLIFHRIQSMQGLH 336
P PP P +SPP P+PT +P V R+L L R S Q H
Sbjct: 15 PPPPQEPAPLSPPPPLPTPK-------PIPTVADNFRSLLRSGEALLRFAFRGNSGQLTH 67
Query: 337 RHPCPCRP 360
RHP P RP
Sbjct: 68 RHPPPPRP 75
>08_02_1085 + 24237804-24238403
Length = 199
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +2
Query: 353 AARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPV 532
AA AP+ S S AP A A P + + + +DS + + +E +SP
Sbjct: 72 AAAAKAPSGKSEAPSEAPDAESGAESPEAGEESGKSPASAPKDSSS--SSSEEEEASSPD 129
Query: 533 SHVTDNEDDCRKDGPSPELENG 598
S D ED+ + P+ E +G
Sbjct: 130 S--GDMEDETAAEAPTAEEASG 149
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 341 TRAHAARTYAPARSSARQSTAPAA-ACNARRPSTSARTSHNATRSRRDSG 487
T AAR SAR+ TAP+A A A P++SAR + R+R SG
Sbjct: 3 TSGAAARPPVATTLSARRGTAPSATAAAASCPASSARRTTWRPRARLSSG 52
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 136 SEIDSPVGTPQPPAIPNQVSPPGPIP 213
S + P P PP++PN++ PP P P
Sbjct: 631 SVLPPPPPPPPPPSLPNRLVPPPPAP 656
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 252
P P PP +PN+ PP P P N + P
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPP 636
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQL 249
P P PP P +PPGP PT+ H +L
Sbjct: 146 PKAAPPPPPPPPPHAPPGPPPTKGVATPHAKKL 178
>08_02_1212 - 25325911-25327047
Length = 378
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 519 SSCRRA*QRRVPESRRERVALCDVRAEVEGRRALQAAAGAVD-WR 388
S RR + ES R A+ D+RAEV RRA + AGA D WR
Sbjct: 278 SLVRRQLEALNAESGMLRRAVEDLRAEVGSRRAAVSTAGAPDTWR 322
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 70 QYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPI 210
+Y + +T V F LQ +ID TP PP P V PP +
Sbjct: 116 EYLRDDCLTIVCDLTVFMELQTEDIDVDTATPPPPPPPTVVVPPSDL 162
>03_02_0294 + 7176906-7177532
Length = 208
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 371 PARSS--ARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVT 544
PA S+ AR + A AAA NA + R+S +T + + +CY +T +S
Sbjct: 28 PATSAVVARGTNATAAAANATVMARRGRSSPLSTATTEEEQQYICYLCRGRNTLMISWCP 87
Query: 545 DNEDDC 562
++D+C
Sbjct: 88 LDKDEC 93
>12_02_1009 + 25268666-25269295
Length = 209
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 323 CRVCTGT---RAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTR 493
CR +G A AAR A ++AR S A+ + PS+S+ + A + R G R
Sbjct: 71 CRAASGAGKVAALAARLAAANATAARASVEAASRALEQNPSSSSNGTAAAAAAARRQGMR 130
Query: 494 LC 499
C
Sbjct: 131 SC 132
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 124 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 252
F+ S +P+ TP P A+PN V P P Q F QH LP
Sbjct: 608 FVLPSVGSTPLATPTPGAVPNSVGIPQQ-PLQLF-RQHLGVLP 648
>09_04_0668 +
19325747-19325785,19325825-19325881,19326361-19326490,
19328303-19328352,19328645-19328741,19328834-19328902,
19328986-19329078,19329194-19329317,19329904-19329973,
19330046-19330087,19330245-19330373,19330468-19330575,
19330729-19330771,19330840-19330878,19331076-19331200,
19331397-19331409,19331504-19331574,19331849-19331936,
19332515-19332600,19332708-19332762,19332859-19333028,
19333157-19333273,19333392-19333453,19333734-19333793,
19333855-19333921
Length = 667
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = -1
Query: 546 SVTCETGEVSSCRRA*QRRVPESRRERVALCDVRAEVEGRRALQAAAGA 400
+V+ ++G+ +S R P S RE+ ++C + + V G++ ++ AGA
Sbjct: 541 NVSMQSGQEASTVDKDPSRTPTSVREQASVCSLESGVLGQKVRKSLAGA 589
>03_05_0267 - 22538631-22539452
Length = 273
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +2
Query: 332 CTGTRAHAARTYAPARSSARQSTAPAAACNARRPSTS 442
C+ + A+ + +PAR+S S++P+ C+ARRP+ S
Sbjct: 183 CSPSSPPASPSPSPARTSP-PSSSPSRGCSARRPTPS 218
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 404 PAAACNARRPSTSARTSH--NATRSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKDGP 577
P+ + R+ SA S N + D + LC + L ++ + T+N DD K G
Sbjct: 976 PSRRTSRRKKGVSAEKSKPKNKRSTASDEASMLC-SGLGMNSGVIHDQTENSDDYDKHGN 1034
Query: 578 SPELENG 598
E+E G
Sbjct: 1035 GDEIEEG 1041
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 148 SPVGTPQPPAIPNQVSPPGPIP 213
+P +P PP P+ PPGP P
Sbjct: 51 APQSSPAPPPAPDMTPPPGPGP 72
>08_02_1351 +
26318023-26318665,26319386-26319543,26320843-26320930,
26321953-26322185
Length = 373
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 103 IGSQNFFFL--QESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
IG + F+FL S S PP IP Q+ PP + T
Sbjct: 107 IGDKKFYFLLPTRSIFASAAAARHPPIIPQQMPPPSYVRT 146
>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
Length = 576
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 323 CRVCTGTRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR---SRRDSGTR 493
C T TRA A R APA ++ STA A + ++ + R + + T + R +GT
Sbjct: 117 CLPSTSTRA-APRIAAPAAATTTTSTAAAGSSSSSAVGNAERHASSGTNGFTASRVAGTS 175
Query: 494 LCYARLQEDTSPV 532
R+ D S V
Sbjct: 176 TSTGRVSMDDSYV 188
>07_03_1330 + 25848372-25849157
Length = 261
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 371 PARSSARQSTAPAAACNARRPSTSARTSHNATRSRR 478
PA +SA ST+ + + PSTS SH+ATR R
Sbjct: 222 PANTSATASTSRPSTSTSS-PSTSTSASHSATRRGR 256
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +2
Query: 344 RAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR 469
R+ AAR A RS A +PAAA R T AR A R
Sbjct: 37 RSRAARATARWRSRAAAQGSPAAAARRRSRGTQARRPPAAAR 78
>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
Length = 378
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/81 (24%), Positives = 30/81 (37%)
Frame = +2
Query: 341 TRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQED 520
TRA ++ R S ++ RR + + S N RS R C+ R +
Sbjct: 152 TRASYRKSMEQERISVEETRLKTTTPGHRRRLSDSADS-NYERSPRIVEMDTCHRRSRSS 210
Query: 521 TSPVSHVTDNEDDCRKDGPSP 583
+ H D+ DC P P
Sbjct: 211 RIAIRHSRDHSSDCLTPAPMP 231
>01_06_0044 - 25922298-25923434
Length = 378
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = +1
Query: 259 ESRNLAACPCRLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPIYRSRCRL*RTPPLH 438
++ A+ L+L+ G + C PYL + + R RCR+ +
Sbjct: 90 DTAGAASIATSLALVPPATPINHGANHSACIFGPYLPLSSRRSLIVLRRRCRVIGHQD-Y 148
Query: 439 LSPYITQCNPLSSRLWYTP 495
L +T CNP+S W P
Sbjct: 149 LHSGLTVCNPVSGERWVLP 167
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVS---PP--GPIPTQTFTNQHYVQLPGV 258
P+G P PP P QV PP G +P + +Q PGV
Sbjct: 80 PLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPGV 120
>07_03_1568 -
27788314-27788619,27789125-27789294,27789868-27789979,
27790063-27790117,27790201-27790316,27790731-27790812,
27790974-27791228,27791326-27791454,27791539-27791747
Length = 477
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 401 APAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKD 571
+PAA +A STSA T + RL LQ+D + H+ ED+ D
Sbjct: 46 SPAAPLSAAAVSTSAATVEAPATAAYPVYGRLLPCPLQDDPPRIEHLVAREDEVAVD 102
>05_02_0006 - 5541290-5541961
Length = 223
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 368 APARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRL 496
+P S++R S PAA+ RP++SA H+ R+R D GT L
Sbjct: 138 SPGSSASRSS--PAASQG--RPTSSAVPPHSLARARVDKGTDL 176
>03_02_0463 -
8673313-8673639,8674040-8674126,8674710-8674790,
8674896-8675048,8675129-8675185,8675293-8675569,
8675634-8675749,8676372-8676523,8676627-8676816,
8676935-8677345
Length = 616
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2
Query: 353 AARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPV 532
AA T+ P+R +AR +T AAA R + +A + R+ R G R C A E ++ +
Sbjct: 5 AAATFTPSRLAARPATPAAAAAPVR--ARAAVAAGGRRRTSRRGGVR-CSAGKPEASAVI 61
Query: 533 S 535
+
Sbjct: 62 N 62
>02_02_0343 + 9163976-9165220
Length = 414
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 232 QHYVQL-PGVESRNLAACPCRLSLI--FHRIQSMQGLHRHPCP 351
+H +QL ++ A CP LSL H I S+Q LH + CP
Sbjct: 326 EHALQLLTSLKQLYFADCPSLLSLPDGLHHISSLQKLHIYNCP 368
>11_01_0098 - 724413-724449,725200-725690
Length = 175
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 341 TRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCY 502
T++ AAR S A + P A C STSA S + SRR +G R+ +
Sbjct: 115 TQSSAARMTTMLASKAPELPLPPACCMEAGVSTSAGAS-TTSPSRRMAGCRMIF 167
>08_02_1213 - 25329775-25330227
Length = 150
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 467 RSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKDGPSPELENGG 601
R RR GT + R Q+ T+ V V D++ R+ GP E +NGG
Sbjct: 12 RRRRRGGTE-GWRRRQKTTAVVDGVFDSKTRWRRGGPGRE-DNGG 54
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = +1
Query: 1 PGYPLRPLPPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAI 180
P P +PP Q + P P+ + GS N + + S P P+I
Sbjct: 167 PPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVPD-QSTQPNPNGPSI 225
Query: 181 PNQVSPPGPIP 213
PNQ PP PIP
Sbjct: 226 PNQ--PPQPIP 234
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 76 PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 219
P + P ++ S++FF LQE+ + VG+ + P Q P P Q
Sbjct: 418 PAKTPQKKIYVSKSFFILQETAVS--VGSNKSATKPGQEEPKTPASNQ 463
>03_03_0217 + 15500943-15502196
Length = 417
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 377 RSSARQSTAPAAACNARRPSTSARTSHNATRSRR 478
R S TAPAAA + R S ++RT A SRR
Sbjct: 277 RRSVSAVTAPAAASSGRWASAASRTMSAARPSRR 310
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 SPVGTPQPPAI-PNQVSPPGPIPTQTFTNQHYVQLP 252
+P G P P+I P + P G +P Q T Q+ + LP
Sbjct: 1413 APAGVPYFPSIAPTLLGPAGALPAQ-HTRQYAINLP 1447
>11_06_0562 + 25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 608 YGRHRSLTLDSVHLFCNRLRYRSRAKPAKYLLADGRNRG 492
+G + + +++H C + R K KY+LA R++G
Sbjct: 1012 HGSSSASSNETIHQVCTEFTWSGRPKRTKYILAPLRDQG 1050
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 142 IDSPVGTPQPPAIPNQVSPPGPIPTQTFT 228
I +P +P P P+ +PP P PT T T
Sbjct: 220 IATPPPSPASPPPPSTATPPPPSPTPTTT 248
>09_04_0249 + 16070331-16070828
Length = 165
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 380 SSARQSTAPAAACNARRPSTSARTSHNATR 469
SS+R S P+ C+A STSAR+SH R
Sbjct: 18 SSSRISRTPSG-CSASAGSTSARSSHGGGR 46
>09_04_0112 - 14757947-14758972
Length = 341
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVE 261
P G+P PP P + P P+P V+LPGV+
Sbjct: 93 PEGSPPPPP-PPALLPAPPMPPHRGEETPEVRLPGVD 128
>04_03_1022 - 21778315-21779007
Length = 230
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTF 225
P P PP +P + PP P P Q +
Sbjct: 39 PPPPPPPPYVPPHLLPPSPAPQQWY 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,087
Number of Sequences: 37544
Number of extensions: 380921
Number of successful extensions: 2209
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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