SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0574
         (666 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0455 + 3487354-3488090,3489172-3489255,3489942-3490554,349...    36   0.038
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75...    34   0.088
07_01_0446 - 3371829-3372132,3374691-3375673                           32   0.36 
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869     32   0.47 
08_02_1085 + 24237804-24238403                                         31   1.1  
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409...    31   1.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   1.4  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    30   1.4  
08_02_1212 - 25325911-25327047                                         30   1.4  
04_03_0991 - 21500143-21500799,21500834-21501172                       30   1.4  
03_02_0294 + 7176906-7177532                                           30   1.4  
12_02_1009 + 25268666-25269295                                         30   1.9  
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450...    30   1.9  
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264...    29   2.5  
03_05_0267 - 22538631-22539452                                         29   2.5  
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    29   3.3  
09_02_0543 + 10427321-10428315,10428440-10429154                       29   3.3  
08_02_1351 + 26318023-26318665,26319386-26319543,26320843-263209...    29   3.3  
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350     29   3.3  
07_03_1330 + 25848372-25849157                                         29   3.3  
06_03_0969 - 26413534-26413594,26415020-26415318                       29   3.3  
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646     29   3.3  
01_06_0044 - 25922298-25923434                                         29   3.3  
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063...    29   4.4  
07_03_1568 - 27788314-27788619,27789125-27789294,27789868-277899...    29   4.4  
05_02_0006 - 5541290-5541961                                           29   4.4  
03_02_0463 - 8673313-8673639,8674040-8674126,8674710-8674790,867...    29   4.4  
02_02_0343 + 9163976-9165220                                           29   4.4  
11_01_0098 - 724413-724449,725200-725690                               28   5.8  
08_02_1213 - 25329775-25330227                                         28   5.8  
07_03_1160 - 24430240-24431268                                         28   5.8  
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809...    28   5.8  
03_03_0217 + 15500943-15502196                                         28   5.8  
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715     28   5.8  
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060...    28   7.7  
11_01_0066 - 536281-537196,537397-537452                               28   7.7  
09_04_0249 + 16070331-16070828                                         28   7.7  
09_04_0112 - 14757947-14758972                                         28   7.7  
04_03_1022 - 21778315-21779007                                         28   7.7  

>03_01_0455 +
           3487354-3488090,3489172-3489255,3489942-3490554,
           3491356-3491583,3492270-3492437,3492828-3494587,
           3494667-3494670
          Length = 1197

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 356 ARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR----SRRDSGTRLCYARLQEDT 523
           ART  P  S A  ST PAAA   +RP   A    +  R     +RD GT    A + + +
Sbjct: 38  ARTMPPPSSQAATSTPPAAATPLQRPPAQATAQPSTQRYYVGVQRDKGTGKWAACVVDPS 97

Query: 524 SPVSH 538
           +P  H
Sbjct: 98  NPTKH 102


>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
            752025-753905,754093-754296,754807-754899,755036-755122,
            755241-755328,755533-755645,755943-757259,757398-758672,
            759166-759273
          Length = 2233

 Score = 34.3 bits (75), Expect = 0.088
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +2

Query: 374  ARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVTDNE 553
            A  SA QST  +A+   RR STS    H ++ SR +      +A + E  S  +H + +E
Sbjct: 2049 ASGSAAQSTKQSASGQKRRSSTSEAEQHGSSTSRHNQ-----HAPVGE-VSGRAHTSKSE 2102

Query: 554  DDCRKDGP 577
             D R  GP
Sbjct: 2103 KDSRHSGP 2110


>07_01_0446 - 3371829-3372132,3374691-3375673
          Length = 428

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 335 TGTRAHAARTYAPARSSARQSTAPAAACNARRPSTSA 445
           TGT+   A T A  RSSA Q +   A C  RRP++SA
Sbjct: 391 TGTQRSRAAT-AAVRSSAIQRSKATAVCTRRRPTSSA 426


>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
          Length = 526

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +1

Query: 163 PQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVES--RNLAACPCRLSLIFHRIQSMQGLH 336
           P PP  P  +SPP P+PT          +P V    R+L      L     R  S Q  H
Sbjct: 15  PPPPQEPAPLSPPPPLPTPK-------PIPTVADNFRSLLRSGEALLRFAFRGNSGQLTH 67

Query: 337 RHPCPCRP 360
           RHP P RP
Sbjct: 68  RHPPPPRP 75


>08_02_1085 + 24237804-24238403
          Length = 199

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/82 (28%), Positives = 36/82 (43%)
 Frame = +2

Query: 353 AARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPV 532
           AA   AP+  S   S AP A   A  P     +  +   + +DS +    +  +E +SP 
Sbjct: 72  AAAAKAPSGKSEAPSEAPDAESGAESPEAGEESGKSPASAPKDSSS--SSSEEEEASSPD 129

Query: 533 SHVTDNEDDCRKDGPSPELENG 598
           S   D ED+   + P+ E  +G
Sbjct: 130 S--GDMEDETAAEAPTAEEASG 149


>07_03_1003 +
           23239829-23240121,23240257-23240349,23240785-23240993,
           23241585-23241729,23241809-23241881,23242165-23242311,
           23242411-23242536,23242653-23242712
          Length = 381

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 341 TRAHAARTYAPARSSARQSTAPAA-ACNARRPSTSARTSHNATRSRRDSG 487
           T   AAR       SAR+ TAP+A A  A  P++SAR +    R+R  SG
Sbjct: 3   TSGAAARPPVATTLSARRGTAPSATAAAASCPASSARRTTWRPRARLSSG 52


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 136 SEIDSPVGTPQPPAIPNQVSPPGPIP 213
           S +  P   P PP++PN++ PP P P
Sbjct: 631 SVLPPPPPPPPPPSLPNRLVPPPPAP 656



 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 252
           P   P PP +PN+  PP P P     N   +  P
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPP 636


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQL 249
           P   P PP  P   +PPGP PT+     H  +L
Sbjct: 146 PKAAPPPPPPPPPHAPPGPPPTKGVATPHAKKL 178


>08_02_1212 - 25325911-25327047
          Length = 378

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 519 SSCRRA*QRRVPESRRERVALCDVRAEVEGRRALQAAAGAVD-WR 388
           S  RR  +    ES   R A+ D+RAEV  RRA  + AGA D WR
Sbjct: 278 SLVRRQLEALNAESGMLRRAVEDLRAEVGSRRAAVSTAGAPDTWR 322


>04_03_0991 - 21500143-21500799,21500834-21501172
          Length = 331

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 70  QYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPI 210
           +Y +   +T V     F  LQ  +ID    TP PP  P  V PP  +
Sbjct: 116 EYLRDDCLTIVCDLTVFMELQTEDIDVDTATPPPPPPPTVVVPPSDL 162


>03_02_0294 + 7176906-7177532
          Length = 208

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +2

Query: 371 PARSS--ARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVT 544
           PA S+  AR + A AAA NA   +   R+S  +T +  +    +CY     +T  +S   
Sbjct: 28  PATSAVVARGTNATAAAANATVMARRGRSSPLSTATTEEEQQYICYLCRGRNTLMISWCP 87

Query: 545 DNEDDC 562
            ++D+C
Sbjct: 88  LDKDEC 93


>12_02_1009 + 25268666-25269295
          Length = 209

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 323 CRVCTGT---RAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTR 493
           CR  +G     A AAR  A   ++AR S   A+    + PS+S+  +  A  + R  G R
Sbjct: 71  CRAASGAGKVAALAARLAAANATAARASVEAASRALEQNPSSSSNGTAAAAAAARRQGMR 130

Query: 494 LC 499
            C
Sbjct: 131 SC 132


>09_02_0121 +
           4502628-4502696,4503727-4503829,4504205-4504328,
           4505963-4506306,4506383-4506487,4507907-4508288,
           4509173-4509437,4509936-4510094,4511150-4511201,
           4511266-4511462,4512865-4513350,4513797-4514093
          Length = 860

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 124 FLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLP 252
           F+  S   +P+ TP P A+PN V  P   P Q F  QH   LP
Sbjct: 608 FVLPSVGSTPLATPTPGAVPNSVGIPQQ-PLQLF-RQHLGVLP 648


>09_04_0668 +
           19325747-19325785,19325825-19325881,19326361-19326490,
           19328303-19328352,19328645-19328741,19328834-19328902,
           19328986-19329078,19329194-19329317,19329904-19329973,
           19330046-19330087,19330245-19330373,19330468-19330575,
           19330729-19330771,19330840-19330878,19331076-19331200,
           19331397-19331409,19331504-19331574,19331849-19331936,
           19332515-19332600,19332708-19332762,19332859-19333028,
           19333157-19333273,19333392-19333453,19333734-19333793,
           19333855-19333921
          Length = 667

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/49 (28%), Positives = 29/49 (59%)
 Frame = -1

Query: 546 SVTCETGEVSSCRRA*QRRVPESRRERVALCDVRAEVEGRRALQAAAGA 400
           +V+ ++G+ +S       R P S RE+ ++C + + V G++  ++ AGA
Sbjct: 541 NVSMQSGQEASTVDKDPSRTPTSVREQASVCSLESGVLGQKVRKSLAGA 589


>03_05_0267 - 22538631-22539452
          Length = 273

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = +2

Query: 332 CTGTRAHAARTYAPARSSARQSTAPAAACNARRPSTS 442
           C+ +   A+ + +PAR+S   S++P+  C+ARRP+ S
Sbjct: 183 CSPSSPPASPSPSPARTSP-PSSSPSRGCSARRPTPS 218


>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
            10470975-10471666,10471912-10472062,10473797-10473864,
            10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 404  PAAACNARRPSTSARTSH--NATRSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKDGP 577
            P+   + R+   SA  S   N   +  D  + LC + L  ++  +   T+N DD  K G 
Sbjct: 976  PSRRTSRRKKGVSAEKSKPKNKRSTASDEASMLC-SGLGMNSGVIHDQTENSDDYDKHGN 1034

Query: 578  SPELENG 598
              E+E G
Sbjct: 1035 GDEIEEG 1041


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 148 SPVGTPQPPAIPNQVSPPGPIP 213
           +P  +P PP  P+   PPGP P
Sbjct: 51  APQSSPAPPPAPDMTPPPGPGP 72


>08_02_1351 +
           26318023-26318665,26319386-26319543,26320843-26320930,
           26321953-26322185
          Length = 373

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +1

Query: 103 IGSQNFFFL--QESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
           IG + F+FL    S   S      PP IP Q+ PP  + T
Sbjct: 107 IGDKKFYFLLPTRSIFASAAAARHPPIIPQQMPPPSYVRT 146


>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
          Length = 576

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 323 CRVCTGTRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR---SRRDSGTR 493
           C   T TRA A R  APA ++   STA A + ++     + R + + T    + R +GT 
Sbjct: 117 CLPSTSTRA-APRIAAPAAATTTTSTAAAGSSSSSAVGNAERHASSGTNGFTASRVAGTS 175

Query: 494 LCYARLQEDTSPV 532
               R+  D S V
Sbjct: 176 TSTGRVSMDDSYV 188


>07_03_1330 + 25848372-25849157
          Length = 261

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 371 PARSSARQSTAPAAACNARRPSTSARTSHNATRSRR 478
           PA +SA  ST+  +   +  PSTS   SH+ATR  R
Sbjct: 222 PANTSATASTSRPSTSTSS-PSTSTSASHSATRRGR 256


>06_03_0969 - 26413534-26413594,26415020-26415318
          Length = 119

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +2

Query: 344 RAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATR 469
           R+ AAR  A  RS A    +PAAA   R   T AR    A R
Sbjct: 37  RSRAARATARWRSRAAAQGSPAAAARRRSRGTQARRPPAAAR 78


>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
          Length = 378

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/81 (24%), Positives = 30/81 (37%)
 Frame = +2

Query: 341 TRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQED 520
           TRA   ++    R S  ++         RR  + +  S N  RS R      C+ R +  
Sbjct: 152 TRASYRKSMEQERISVEETRLKTTTPGHRRRLSDSADS-NYERSPRIVEMDTCHRRSRSS 210

Query: 521 TSPVSHVTDNEDDCRKDGPSP 583
              + H  D+  DC    P P
Sbjct: 211 RIAIRHSRDHSSDCLTPAPMP 231


>01_06_0044 - 25922298-25923434
          Length = 378

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/79 (25%), Positives = 32/79 (40%)
 Frame = +1

Query: 259 ESRNLAACPCRLSLIFHRIQSMQGLHRHPCPCRPYLRTRTVLCPPIYRSRCRL*RTPPLH 438
           ++   A+    L+L+        G +   C   PYL   +     + R RCR+      +
Sbjct: 90  DTAGAASIATSLALVPPATPINHGANHSACIFGPYLPLSSRRSLIVLRRRCRVIGHQD-Y 148

Query: 439 LSPYITQCNPLSSRLWYTP 495
           L   +T CNP+S   W  P
Sbjct: 149 LHSGLTVCNPVSGERWVLP 167


>08_02_0672 -
           19904353-19904839,19905646-19905704,19906137-19906352,
           19906845-19907422,19907506-19908180,19908263-19908653,
           19909469-19909621,19909727-19909980,19911023-19911479
          Length = 1089

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
 Frame = +1

Query: 151 PVGTPQPPAIPNQVS---PP--GPIPTQTFTNQHYVQLPGV 258
           P+G P PP  P QV    PP  G +P   +     +Q PGV
Sbjct: 80  PLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPGV 120


>07_03_1568 -
           27788314-27788619,27789125-27789294,27789868-27789979,
           27790063-27790117,27790201-27790316,27790731-27790812,
           27790974-27791228,27791326-27791454,27791539-27791747
          Length = 477

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +2

Query: 401 APAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKD 571
           +PAA  +A   STSA T      +      RL    LQ+D   + H+   ED+   D
Sbjct: 46  SPAAPLSAAAVSTSAATVEAPATAAYPVYGRLLPCPLQDDPPRIEHLVAREDEVAVD 102


>05_02_0006 - 5541290-5541961
          Length = 223

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 368 APARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRL 496
           +P  S++R S  PAA+    RP++SA   H+  R+R D GT L
Sbjct: 138 SPGSSASRSS--PAASQG--RPTSSAVPPHSLARARVDKGTDL 176


>03_02_0463 -
           8673313-8673639,8674040-8674126,8674710-8674790,
           8674896-8675048,8675129-8675185,8675293-8675569,
           8675634-8675749,8676372-8676523,8676627-8676816,
           8676935-8677345
          Length = 616

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 353 AARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYARLQEDTSPV 532
           AA T+ P+R +AR +T  AAA   R  + +A  +    R+ R  G R C A   E ++ +
Sbjct: 5   AAATFTPSRLAARPATPAAAAAPVR--ARAAVAAGGRRRTSRRGGVR-CSAGKPEASAVI 61

Query: 533 S 535
           +
Sbjct: 62  N 62


>02_02_0343 + 9163976-9165220
          Length = 414

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 232 QHYVQL-PGVESRNLAACPCRLSLI--FHRIQSMQGLHRHPCP 351
           +H +QL   ++    A CP  LSL    H I S+Q LH + CP
Sbjct: 326 EHALQLLTSLKQLYFADCPSLLSLPDGLHHISSLQKLHIYNCP 368


>11_01_0098 - 724413-724449,725200-725690
          Length = 175

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 341 TRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCY 502
           T++ AAR      S A +   P A C     STSA  S   + SRR +G R+ +
Sbjct: 115 TQSSAARMTTMLASKAPELPLPPACCMEAGVSTSAGAS-TTSPSRRMAGCRMIF 167


>08_02_1213 - 25329775-25330227
          Length = 150

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +2

Query: 467 RSRRDSGTRLCYARLQEDTSPVSHVTDNEDDCRKDGPSPELENGG 601
           R RR  GT   + R Q+ T+ V  V D++   R+ GP  E +NGG
Sbjct: 12  RRRRRGGTE-GWRRRQKTTAVVDGVFDSKTRWRRGGPGRE-DNGG 54


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 22/71 (30%), Positives = 29/71 (40%)
 Frame = +1

Query: 1   PGYPLRPLPPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAI 180
           P  P   +PP   Q  +        P   P+ +  GS N +     +  S    P  P+I
Sbjct: 167 PPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVPD-QSTQPNPNGPSI 225

Query: 181 PNQVSPPGPIP 213
           PNQ  PP PIP
Sbjct: 226 PNQ--PPQPIP 234


>04_04_1188 +
           31579833-31579914,31580001-31580176,31580822-31580923,
           31581015-31581245,31581821-31581922,31582092-31582184,
           31582275-31582379,31582455-31582514,31582621-31582698,
           31582778-31582924,31583011-31583109,31583178-31583267,
           31583360-31583451,31583529-31583646,31583783-31583871,
           31583998-31584088,31584203-31584294,31584442-31584749,
           31584866-31584897
          Length = 728

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 76  PQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 219
           P + P  ++  S++FF LQE+ +   VG+ +    P Q  P  P   Q
Sbjct: 418 PAKTPQKKIYVSKSFFILQETAVS--VGSNKSATKPGQEEPKTPASNQ 463


>03_03_0217 + 15500943-15502196
          Length = 417

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +2

Query: 377 RSSARQSTAPAAACNARRPSTSARTSHNATRSRR 478
           R S    TAPAAA + R  S ++RT   A  SRR
Sbjct: 277 RRSVSAVTAPAAASSGRWASAASRTMSAARPSRR 310


>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
          Length = 1536

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +1

Query: 148  SPVGTPQPPAI-PNQVSPPGPIPTQTFTNQHYVQLP 252
            +P G P  P+I P  + P G +P Q  T Q+ + LP
Sbjct: 1413 APAGVPYFPSIAPTLLGPAGALPAQ-HTRQYAINLP 1447


>11_06_0562 + 25003246-25003746,25004975-25005214,25005576-25006097,
            25006184-25007248,25007350-25007656,25007761-25008001,
            25008104-25008302,25008771-25008852,25008959-25009209,
            25010061-25010219,25010220-25010603
          Length = 1316

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 608  YGRHRSLTLDSVHLFCNRLRYRSRAKPAKYLLADGRNRG 492
            +G   + + +++H  C    +  R K  KY+LA  R++G
Sbjct: 1012 HGSSSASSNETIHQVCTEFTWSGRPKRTKYILAPLRDQG 1050


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 142 IDSPVGTPQPPAIPNQVSPPGPIPTQTFT 228
           I +P  +P  P  P+  +PP P PT T T
Sbjct: 220 IATPPPSPASPPPPSTATPPPPSPTPTTT 248


>09_04_0249 + 16070331-16070828
          Length = 165

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 380 SSARQSTAPAAACNARRPSTSARTSHNATR 469
           SS+R S  P+  C+A   STSAR+SH   R
Sbjct: 18  SSSRISRTPSG-CSASAGSTSARSSHGGGR 46


>09_04_0112 - 14757947-14758972
          Length = 341

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVE 261
           P G+P PP  P  + P  P+P         V+LPGV+
Sbjct: 93  PEGSPPPPP-PPALLPAPPMPPHRGEETPEVRLPGVD 128


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 151 PVGTPQPPAIPNQVSPPGPIPTQTF 225
           P   P PP +P  + PP P P Q +
Sbjct: 39  PPPPPPPPYVPPHLLPPSPAPQQWY 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,087
Number of Sequences: 37544
Number of extensions: 380921
Number of successful extensions: 2209
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -