Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0574
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 33 0.24
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 30 1.7
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 30 1.7
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 1.7
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 30 1.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 30 1.7
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.7
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 3.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 29 3.9
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 3.9
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 3.9
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 28 5.2
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 5.2
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 5.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 6.8
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 6.8
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.8
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 6.8
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 28 6.8
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 28 6.8
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 28 6.8
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 28 6.8
U61946-4|AAC24394.1| 337|Caenorhabditis elegans Serpentine rece... 27 9.1
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 9.1
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL032625-1|CAA21523.1| 326|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 27 9.1
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 516 SCRRA*QRRVPESRRERVALCDVRAEVEGRRALQAA 409
+CRR +R+ +S RE VA CDV A +E LQ A
Sbjct: 317 TCRRGAERQQCDSLREAVATCDVMASLEIGTQLQRA 352
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/83 (30%), Positives = 37/83 (44%)
Frame = +1
Query: 52 HAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 231
+AY Q Y + I + + +Q E+ P G P PP P Q + G Q + N
Sbjct: 41 NAYEHQAYQGLQNIHDDLANQ-----YHQELGYPTGPPLPPPPPPQPA-NGYQDPQNYQN 94
Query: 232 QHYVQLPGVESRNLAACPCRLSL 300
HY P + S + A+C R+ L
Sbjct: 95 -HYESPPSLSSASAASCLSRIRL 116
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +1
Query: 19 PLPPITLQEVEH-AYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
P PP T +EV A + P P +N E+ + P P +PN V
Sbjct: 207 PPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVP 266
Query: 196 PPGPIPTQTFTNQHYVQLP 252
P P P T + +P
Sbjct: 267 SPPPPPANTTVTEEKTTVP 285
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIP--NQVSP 198
P + ++EH Y PQQ+ ++ Q+ Q I P P +IP S
Sbjct: 155 PGLPGSQMEHQYPMHLQPQQQTLSRPGSQQSQHIQQPGSIQRPGSVLAPGSIPPGGPASQ 214
Query: 199 PGPIPTQTFTNQHYVQLPG 255
GP Q F VQ PG
Sbjct: 215 TGPQSIQVF-GPGSVQPPG 232
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +1
Query: 37 LQEVEHAYFAQQYPQQRPITEVIGS--QNFFFLQE---SEIDSPVGTPQPPAIPNQVSPP 201
L +V+ + YP+ P + +I Q+F L E E P+ P PP P Q
Sbjct: 58 LMDVQISVSPPSYPRDHPFSSIIRQKRQSFASLPEWCQCEPTKPICPPGPPGQPGQQGQK 117
Query: 202 GP 207
GP
Sbjct: 118 GP 119
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 145 DSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVESRNLAACPC 288
+ P G P P P + PGP+ T + PG+ + A CPC
Sbjct: 239 EGPDGLPGPAGPPGKPGMPGPMGTPGGPGE-----PGIPGSDAAYCPC 281
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 PQQRPITEV-IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
P+ P+ + +G+ NF L + I S + P P P VS P P+ T
Sbjct: 526 PKPAPVQPISLGNINFVALAQQLIASGIKLPLPIVTPPVVSTPAPVIT 573
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQ--RPIT-EVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
PP+ LQ + AQ+ P++ P+T E I Q I P TP P P V
Sbjct: 253 PPLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQY--IQEPTTTPAPLEAPAPVE 310
Query: 196 PPGPIPTQTFT 228
+PT TF+
Sbjct: 311 NAPNLPTPTFS 321
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 25 PPITLQEVEHAYFAQQYPQQ--RPIT-EVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVS 195
PP+ LQ + AQ+ P++ P+T E I Q I P TP P P V
Sbjct: 253 PPLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQY--IQEPTTTPAPLEAPAPVE 310
Query: 196 PPGPIPTQTFT 228
+PT TF+
Sbjct: 311 NAPNLPTPTFS 321
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 142 IDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQ-HYVQLPGVESRNLAACPCRLSLI 303
+ +PV P P IP V PP P T T + Q +++ G+ + A R ++
Sbjct: 1113 VAAPVPVPTPFTIPPPVPPPPPTATSTQSQQPQFLEGLGMTDNEIVADAIRRGMV 1167
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 380 SSARQSTAPAAACNARR-PSTSARTSHNATRSRRDSGTRLCYARLQEDTSPVSHVTDNED 556
+SA +P ++ A P+TSA ++ +A T A E T+P + VT E
Sbjct: 1286 TSAPDGVSPTSSATAPEVPTTSASSTPDAVEESGIPSTSKPTAEPLETTAPSTEVTSPEG 1345
Query: 557 DCRKDGPSPELENGGD 604
++ P E G+
Sbjct: 1346 SGTEESTLPPTEGSGE 1361
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 148 SPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGVESRNLAACP 285
+P Q + P Q +PP P+P QT Q P V+ A P
Sbjct: 279 NPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQQAPTRAAP 324
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 130 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 219
+ES D P GT P P Q PP P P Q
Sbjct: 211 EESLDDKPSGTKMPAQPPPQQHPPPPQPQQ 240
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1
Query: 112 QNFFFLQESEIDSPVGTPQPPAI---PNQVSPPGPIPTQTFTNQHYVQLPGVE 261
Q+ + + I PVG P PP P + PPGP F H PGVE
Sbjct: 118 QSLIYQRPPCIRCPVGEPGPPGPDGEPGEQGPPGPPGVDNFEVGHDGP-PGVE 169
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 230 PAGPPGPPGAPGNDGPPGP 248
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +2
Query: 329 VCTGTRAHAARTYAP-ARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTRLCYA 505
+C TR AA + A S+ S AP+ + N R RR+S T
Sbjct: 615 ICALTRKWAASGASKQAPPSSSSSEAPSVEAEVKEEVVEEEDEENEARMRRES-TATSSI 673
Query: 506 RLQEDTSPVSHVTDN 550
DT P+ + +N
Sbjct: 674 VYNNDTGPLEFIEEN 688
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/73 (28%), Positives = 28/73 (38%)
Frame = +1
Query: 1 PGYPLRPLPPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAI 180
PG P RP+PP + + Y Q P ++I N + + P Q P
Sbjct: 574 PGTPGRPIPPYAMGQ------PPMYHQAGPQGQMIQRMNSYPGNAQQFRPPPQQSQQPIP 627
Query: 181 PNQVSPPGPIPTQ 219
P Q P P P Q
Sbjct: 628 PQQQQQP-PAPPQ 639
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 7 YPLRPLPPITLQEVEHAYFAQQYPQ-QRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIP 183
YP +++Q++ QQ+ Q Q+ I + Q Q+ ++ P PP P
Sbjct: 499 YPGPSAQGLSMQQIAAIQQQQQHQQYQQRILQQQQQQAMMQQQQQQVQQQQQAP-PPTTP 557
Query: 184 NQVSPPGPIPT 216
N P G PT
Sbjct: 558 NPGHPQGFFPT 568
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 121 FFLQESEIDSPVGTPQPPAIPNQVSPPGPIP 213
FFLQ + P+ T PP PN PP P P
Sbjct: 811 FFLQYASNSQPLSTLPPPPPPN--PPPAPQP 839
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 228 PPGPPGPPGAPGNDGPPGP 246
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 103 IGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTN 231
I QN LQ + SP P P V PP P P T N
Sbjct: 493 IEQQNQLMLQHHQFSSPPAAPPPSQQQQVVQPPIP-PAPTTAN 534
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 133 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 133 ESEIDSPVGTPQPPAIPNQVSPPGPIPT 216
ES I S + TP P P S P P+P+
Sbjct: 1229 ESGISSSISTPHPEPTPAITSCPPPVPS 1256
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 356 ARTYAPARSSARQSTAPAAACNARRPSTSART-SHNATRSRRDSGT 490
+++ +PA+S+ + S +PA A + T +R+ S +ATR R S T
Sbjct: 29 SKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSATRGRTASKT 74
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 151 PVGTPQPPAIPNQVSPPGP 207
P G P PP P PPGP
Sbjct: 223 PPGPPGPPGAPGNDGPPGP 241
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 130 QESEIDSPVGTPQP-PAIPNQVSPPGPIP 213
++ + +P G P P PA+P + SP P+P
Sbjct: 140 KKDDFFAPPGAPDPVPAVPVEPSPAPPVP 168
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 323 CRVCTGTRAHAARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRSRRDSG 487
CR GT + + S+ S+APA+ C+ R + TS +++ S SG
Sbjct: 305 CRKHFGTAKYFLIHHYYYHSTDLTSSAPASTCSTRWSPMTVSTSESSSTSESSSG 359
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 356 ARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRS 472
A T A A S A S A + +ARRP+T+ R + A S
Sbjct: 161 AETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTS 199
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 356 ARTYAPARSSARQSTAPAAACNARRPSTSARTSHNATRS 472
A T A A S A S A + +ARRP+T+ R + A S
Sbjct: 161 AETAASASSEASTSNGVATSSSARRPATAKRDTLAAPTS 199
>U61946-4|AAC24394.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein223 protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 300 EAEAAWACCQVPGLYPG*LYIMLIGKSLSWDRSRWRYLI 184
E AA C V GL+ L+I++I K L W + R +L+
Sbjct: 109 EIIAAMFACSVIGLFENRLFILMIDKRL-WGQIRIPFLV 146
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 148 SPVGTPQPPAIPNQVSPPGP 207
+P G P PP P PPGP
Sbjct: 222 APPGPPGPPGPPGPQGPPGP 241
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 130 QESEIDSPVGTPQPPAIPNQVSPPGPIPTQ 219
Q+SE S TP+PP +SPP P++
Sbjct: 1146 QQSESGSKPSTPRPPRFRISMSPPRKPPSE 1175
>AL032625-1|CAA21523.1| 326|Caenorhabditis elegans Hypothetical
protein Y37H9A.2 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 386 ARQSTAPAAACNARRPSTSARTSHNATRSRRDSGTR 493
+R AP + + R TSA ++ A RSR DS R
Sbjct: 238 SRNQAAPTGSRSGSRSRTSAASNVGAGRSRDDSSVR 273
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 LQESEIDSPVGTPQPPAIPNQVSP--PGPIPTQTFTNQHYVQLPG 255
L+ +++ +G P P +P ++P GP T+ H LPG
Sbjct: 43 LKTAQLHKKLGKPVPEDVPTIIAPGADGPTETKAKPKWHQQALPG 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,908,387
Number of Sequences: 27780
Number of extensions: 301767
Number of successful extensions: 1822
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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