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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0571
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    33   0.18 
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395     30   1.7  
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697...    29   3.0  
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052...    29   3.0  
04_04_1600 + 34704527-34704758,34705393-34706777                       29   3.0  
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947...    29   4.0  
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092...    29   4.0  
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764...    28   6.9  
05_03_0293 - 11813846-11813965,11814073-11814408,11814516-118146...    28   9.2  
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968...    28   9.2  
02_03_0396 - 18568908-18569032,18569157-18569262                       28   9.2  
02_03_0143 + 15685242-15686298,15688167-15688265,15688998-156890...    28   9.2  

>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = -3

Query: 464 VCVSPRPSRRSLKAFANSLMSSKLIPSTTLLEDWLIVGWFGESANRSASSCDGDFTEPGD 285
           + V  + S+R L A +    SS+L PS T  ED+  V + G S+  + SS       PG 
Sbjct: 490 ISVQQQESKRPLPAES----SSQLQPSNTKKEDFGTVSFSGSSSVEAPSSSSASIINPGQ 545

Query: 284 SLTG 273
           + TG
Sbjct: 546 TATG 549


>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
          Length = 794

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 351 ANDQPVFQQRSRWDQLRRHQGIRE--GLQTATTWSGTYADPSRPSPV 485
           +N+    QQR+R D+LR  +G+ E  G   ++  + T  D  +PSPV
Sbjct: 428 SNESFAMQQRARPDELRTDRGLLERCGKLLSSIQAFTAGDDQQPSPV 474


>09_06_0020 -
           20267190-20267612,20269086-20269495,20269573-20269747,
           20270833-20271066,20271164-20271265,20271354-20272091,
           20272204-20272321,20272417-20272667,20272768-20272932
          Length = 871

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
 Frame = +2

Query: 593 KEAEERYASGQNHLTDFIGME-------PSKKRKRRTSFTPQALELLNAHFERNTHP 742
           +E E    SG ++L    G E       P KK+KR    TPQ ++ L A F+   HP
Sbjct: 91  REEENDSRSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 147


>07_03_1731 -
           29102403-29102720,29103529-29103735,29103937-29105210,
           29105298-29105734,29106370-29106764,29106921-29107051,
           29109034-29109052
          Length = 926

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = +1

Query: 574 GARTLDEGSRGKV------RIRSKSSDGLHWNGAEQKAQTANIVHTSGPRTAQRALRKEH 735
           G+ T   G+ GK       RI+ K+ DG   NG+   A  + +      ++ +R L  E 
Sbjct: 74  GSSTASTGNGGKTPSDDDSRIKKKALDGGDSNGSSSSASNSPVTKVCRSKSRRRNLNNEE 133

Query: 736 PS 741
           PS
Sbjct: 134 PS 135


>04_04_1600 + 34704527-34704758,34705393-34706777
          Length = 538

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 655 LHSNEVRQMILTGCVPFLGFL 593
           LH NEV+Q +L GC+ F+  L
Sbjct: 93  LHINEVQQEVLVGCLSFISLL 113


>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
            15796089-15796272,15796349-15796696,15796753-15797450,
            15798208-15798900
          Length = 2299

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 277  VKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVDGIN 396
            V   P S    SHD+ D+  DSP  PT +     V+  I+
Sbjct: 888  VSSPPSSPPHVSHDEMDVSGDSPALPTSADGDRTVMSDID 927


>02_05_0286 -
           27506925-27507278,27508439-27508812,27509041-27509218,
           27510878-27511105,27511215-27511316,27511415-27512131,
           27512270-27512387,27512500-27512744,27512854-27513054,
           27513920-27514324
          Length = 973

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 614 ASGQNHLTDFIGMEPSKKRKRRTSFTPQALELLNAHFERNTHP 742
           A+G++ + D       K++KR    TPQ ++ L A F+   HP
Sbjct: 250 AAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHP 292


>04_04_0841 -
           28574497-28574883,28575815-28576188,28576262-28576439,
           28576816-28576896,28578134-28578361,28578460-28578579,
           28578646-28579353,28579471-28579588,28579686-28579978,
           28580101-28580169
          Length = 851

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 656 PSKKRKRRTSFTPQALELLNAHFERNTHP 742
           P K++KR    TPQ ++ L A F+   HP
Sbjct: 101 PPKRKKRYHRHTPQQIQELEAMFKECPHP 129


>05_03_0293 -
           11813846-11813965,11814073-11814408,11814516-11814617,
           11814729-11814912,11815012-11815196,11815949-11816095,
           11816310-11816426
          Length = 396

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -3

Query: 671 CAFCSAPFQ*SPSDDFDRM-RTFPRLPSSNVRAPV*FSAHFLVLYPISQICRSHFAICWS 495
           CAF    F    + D D++ ++FP++PS  +RA +    H L+    + +   H  I   
Sbjct: 333 CAFYVMRFMEKYNGDADKLLQSFPKVPSDKLRAQI---LHHLIFNRFNSVQELHQDIETF 389

Query: 494 SVTDRA 477
            V D A
Sbjct: 390 RVPDNA 395


>04_04_0998 -
           29996117-29996242,29996345-29996486,29996613-29996812,
           29997112-29997497,29997769-29998318,29998949-29999296
          Length = 583

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -3

Query: 137 HVHFSL*HY*NTVRSSPSLCNASQALEKRIFCLACXAPYCS 15
           HV  SL     T+R         +  EK IFC AC A YC+
Sbjct: 519 HVRLSLRPVGGTIRCPKCRERNFKDDEKYIFCWACRANYCT 559


>02_03_0396 - 18568908-18569032,18569157-18569262
          Length = 76

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 101 VRSSPSLCNASQALEKRIFCL 39
           V +SP L NASQ LE+++ CL
Sbjct: 27  VAASPKLSNASQNLEQKLDCL 47


>02_03_0143 +
           15685242-15686298,15688167-15688265,15688998-15689072,
           15689309-15689364,15689786-15689875
          Length = 458

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 518 ICRFEKLDITPKSAQKIKPVLERWMKEAEERYASGQNHLTDF 643
           I R E L +      + K   E+W+ E+E +YA   N  T F
Sbjct: 209 ITRDENLAVADVEEWRAKEYTEKWLAESETKYAFPINFPTGF 250


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,226,255
Number of Sequences: 37544
Number of extensions: 417316
Number of successful extensions: 1476
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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