BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0571 (754 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 33 0.18 11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 30 1.7 09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 29 3.0 07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 29 3.0 04_04_1600 + 34704527-34704758,34705393-34706777 29 3.0 03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 4.0 02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 29 4.0 04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 28 6.9 05_03_0293 - 11813846-11813965,11814073-11814408,11814516-118146... 28 9.2 04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968... 28 9.2 02_03_0396 - 18568908-18569032,18569157-18569262 28 9.2 02_03_0143 + 15685242-15686298,15688167-15688265,15688998-156890... 28 9.2 >06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-268460, 268779-268843,268854-269073,269163-269438,269547-269663, 269776-269853,269930-270184,270235-270323,270403-270816 Length = 865 Score = 33.5 bits (73), Expect = 0.18 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -3 Query: 464 VCVSPRPSRRSLKAFANSLMSSKLIPSTTLLEDWLIVGWFGESANRSASSCDGDFTEPGD 285 + V + S+R L A + SS+L PS T ED+ V + G S+ + SS PG Sbjct: 490 ISVQQQESKRPLPAES----SSQLQPSNTKKEDFGTVSFSGSSSVEAPSSSSASIINPGQ 545 Query: 284 SLTG 273 + TG Sbjct: 546 TATG 549 >11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 Length = 794 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 351 ANDQPVFQQRSRWDQLRRHQGIRE--GLQTATTWSGTYADPSRPSPV 485 +N+ QQR+R D+LR +G+ E G ++ + T D +PSPV Sbjct: 428 SNESFAMQQRARPDELRTDRGLLERCGKLLSSIQAFTAGDDQQPSPV 474 >09_06_0020 - 20267190-20267612,20269086-20269495,20269573-20269747, 20270833-20271066,20271164-20271265,20271354-20272091, 20272204-20272321,20272417-20272667,20272768-20272932 Length = 871 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Frame = +2 Query: 593 KEAEERYASGQNHLTDFIGME-------PSKKRKRRTSFTPQALELLNAHFERNTHP 742 +E E SG ++L G E P KK+KR TPQ ++ L A F+ HP Sbjct: 91 REEENDSRSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHP 147 >07_03_1731 - 29102403-29102720,29103529-29103735,29103937-29105210, 29105298-29105734,29106370-29106764,29106921-29107051, 29109034-29109052 Length = 926 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = +1 Query: 574 GARTLDEGSRGKV------RIRSKSSDGLHWNGAEQKAQTANIVHTSGPRTAQRALRKEH 735 G+ T G+ GK RI+ K+ DG NG+ A + + ++ +R L E Sbjct: 74 GSSTASTGNGGKTPSDDDSRIKKKALDGGDSNGSSSSASNSPVTKVCRSKSRRRNLNNEE 133 Query: 736 PS 741 PS Sbjct: 134 PS 135 >04_04_1600 + 34704527-34704758,34705393-34706777 Length = 538 Score = 29.5 bits (63), Expect = 3.0 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -1 Query: 655 LHSNEVRQMILTGCVPFLGFL 593 LH NEV+Q +L GC+ F+ L Sbjct: 93 LHINEVQQEVLVGCLSFISLL 113 >03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771, 15796089-15796272,15796349-15796696,15796753-15797450, 15798208-15798900 Length = 2299 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +1 Query: 277 VKLSPGSVKSPSHDDADLLADSPNQPTISQSSSNVVDGIN 396 V P S SHD+ D+ DSP PT + V+ I+ Sbjct: 888 VSSPPSSPPHVSHDEMDVSGDSPALPTSADGDRTVMSDID 927 >02_05_0286 - 27506925-27507278,27508439-27508812,27509041-27509218, 27510878-27511105,27511215-27511316,27511415-27512131, 27512270-27512387,27512500-27512744,27512854-27513054, 27513920-27514324 Length = 973 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 614 ASGQNHLTDFIGMEPSKKRKRRTSFTPQALELLNAHFERNTHP 742 A+G++ + D K++KR TPQ ++ L A F+ HP Sbjct: 250 AAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHP 292 >04_04_0841 - 28574497-28574883,28575815-28576188,28576262-28576439, 28576816-28576896,28578134-28578361,28578460-28578579, 28578646-28579353,28579471-28579588,28579686-28579978, 28580101-28580169 Length = 851 Score = 28.3 bits (60), Expect = 6.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 656 PSKKRKRRTSFTPQALELLNAHFERNTHP 742 P K++KR TPQ ++ L A F+ HP Sbjct: 101 PPKRKKRYHRHTPQQIQELEAMFKECPHP 129 >05_03_0293 - 11813846-11813965,11814073-11814408,11814516-11814617, 11814729-11814912,11815012-11815196,11815949-11816095, 11816310-11816426 Length = 396 Score = 27.9 bits (59), Expect = 9.2 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -3 Query: 671 CAFCSAPFQ*SPSDDFDRM-RTFPRLPSSNVRAPV*FSAHFLVLYPISQICRSHFAICWS 495 CAF F + D D++ ++FP++PS +RA + H L+ + + H I Sbjct: 333 CAFYVMRFMEKYNGDADKLLQSFPKVPSDKLRAQI---LHHLIFNRFNSVQELHQDIETF 389 Query: 494 SVTDRA 477 V D A Sbjct: 390 RVPDNA 395 >04_04_0998 - 29996117-29996242,29996345-29996486,29996613-29996812, 29997112-29997497,29997769-29998318,29998949-29999296 Length = 583 Score = 27.9 bits (59), Expect = 9.2 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 137 HVHFSL*HY*NTVRSSPSLCNASQALEKRIFCLACXAPYCS 15 HV SL T+R + EK IFC AC A YC+ Sbjct: 519 HVRLSLRPVGGTIRCPKCRERNFKDDEKYIFCWACRANYCT 559 >02_03_0396 - 18568908-18569032,18569157-18569262 Length = 76 Score = 27.9 bits (59), Expect = 9.2 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -3 Query: 101 VRSSPSLCNASQALEKRIFCL 39 V +SP L NASQ LE+++ CL Sbjct: 27 VAASPKLSNASQNLEQKLDCL 47 >02_03_0143 + 15685242-15686298,15688167-15688265,15688998-15689072, 15689309-15689364,15689786-15689875 Length = 458 Score = 27.9 bits (59), Expect = 9.2 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 518 ICRFEKLDITPKSAQKIKPVLERWMKEAEERYASGQNHLTDF 643 I R E L + + K E+W+ E+E +YA N T F Sbjct: 209 ITRDENLAVADVEEWRAKEYTEKWLAESETKYAFPINFPTGF 250 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,226,255 Number of Sequences: 37544 Number of extensions: 417316 Number of successful extensions: 1476 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1476 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2004270760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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