Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0571
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    28   0.36 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 24/73 (32%), Positives = 32/73 (43%)
 Frame = +3

Query: 315 RRRRSVGRLTKPANDQPVFQQRSRWDQLRRHQGIREGLQTATTWSGTYADPSRPSPVGHR 494
           RRR S G  T   +    +QQ+ +  QL  H G RE +    T       P+ P+P    
Sbjct: 136 RRRHSFGTSTHRHHLPQQYQQQQQQHQL-EHNGGREQMMKNET--SIDEVPNAPAPKAPC 192

Query: 495 RPAYSKVRSADLR 533
           +PA S   S  LR
Sbjct: 193 QPAGSTSDSGTLR 205


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 324  RSVGRLTKPANDQPVFQQRSR 386
            RSV R+     D P+F +R+R
Sbjct: 1324 RSVARIVTSFTDSPLFSRRNR 1344


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,806
Number of Sequences: 2352
Number of extensions: 14278
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)