Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0570
         (634 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...   101   1e-22
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...   100   2e-22
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...    99   5e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...    99   6e-22
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...    75   1e-14
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch...    32   0.079
SPAC3H1.07 |||arginase |Schizosaccharomyces pombe|chr 1|||Manual       29   0.56 
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom...    28   1.3  
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy...    28   1.3  
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce...    27   2.3  
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc...    27   3.0  
SPAC1B3.17 |clr2||chromatin silencing protein Clr2|Schizosacchar...    26   5.2  
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa...    25   6.9  
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac...    25   9.1  
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ...    25   9.1  

>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score =  101 bits (241), Expect = 1e-22
 Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = +2

Query: 5   DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
           D  LLG+F L GIPPAPRGVPQIEV FD+DANGI++VSA +KGTGK Q+I I    G LS
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLS 509

Query: 182 KDEIENMVKAAEQFAAADK 238
           K+EI+ MV  AE++ A D+
Sbjct: 510 KEEIDRMVSEAEKYKAEDE 528


>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score =  100 bits (240), Expect = 2e-22
 Identities = 50/79 (63%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
 Frame = +2

Query: 5   DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
           D  LLG+F L GIPPAPRGVPQIEV FD+DANGI++VSA +KGTGK Q+I I    G LS
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLS 509

Query: 182 KDEIENMVKAAEQFAAADK 238
           K+EI+ MV  AE++ A D+
Sbjct: 510 KEEIDRMVAEAEKYKAEDE 528


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score = 99.1 bits (236), Expect = 5e-22
 Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = +2

Query: 5   DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDK-GTGKEQQIVIQ-*SGGL 178
           DN LLG+F L GIPPAPRGVPQIEV F++DANG++ VSA DK G GK +++VI+   G L
Sbjct: 479 DNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRL 538

Query: 179 SKDEIENMVKAAEQFAAADK 238
           S+++IE MVK AE+FA  DK
Sbjct: 539 SEEDIERMVKEAEEFAEEDK 558


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score = 98.7 bits (235), Expect = 6e-22
 Identities = 45/77 (58%), Positives = 58/77 (75%)
 Frame = +2

Query: 5   DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ*SGGLSK 184
           DNKL+G F L GI PAP+G PQIEV+FD+DA+GI++VSARDK T K+  I +  S GL+ 
Sbjct: 493 DNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSGLTD 552

Query: 185 DEIENMVKAAEQFAAAD 235
            EIE MV  AE++ A+D
Sbjct: 553 SEIEAMVADAEKYRASD 569



 Score = 38.3 bits (85), Expect = 0.001
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +3

Query: 324 LPQDECDKLREEMNKLRELLAKKDT----IEPEELRTATGQLQQASLKLFEQAYKKMAAE 491
           L Q   + LR ++  LRE +AK +     I  E+++    ++QQ SLK+FE  YK     
Sbjct: 600 LDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYKNQNQG 659

Query: 492 REGS 503
            E S
Sbjct: 660 NESS 663


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score = 74.5 bits (175), Expect = 1e-14
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = +2

Query: 2   SDNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ*S-GGL 178
           ++N+ LG+F L GIPP PRG  ++E  F++DANGI+ V+A +K TG+   I I  S G L
Sbjct: 454 AENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHL 513

Query: 179 SKDEIENMVKAAEQFAAADK 238
           S  +I+ M++ A++F   DK
Sbjct: 514 SSTKIQEMIENADKFKQQDK 533


>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1316

 Score = 31.9 bits (69), Expect = 0.079
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -2

Query: 129 LSRADTCTMPLASMSKATSICGTPRGAGGMPTSENCPSSLLS 4
           LSR +   +P+AS  K+ S   T  G G   TSE+ P S L+
Sbjct: 480 LSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLT 521


>SPAC3H1.07 |||arginase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 323

 Score = 29.1 bits (62), Expect = 0.56
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 88  VEGDLYLRHAARRGRDAHQRELPQQLVV 5
           ++  LY+ +  R+ RDA QREL QQ VV
Sbjct: 85  MKNPLYVSNVTRQVRDAVQRELEQQRVV 112


>SPAC1296.03c |sxa2||serine carboxypeptidase
           Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 451 LNCLNRLTRRWQLNAKEANTATAADGSDAEPREEGGEELD 570
           ++ L   T  W+ + ++ANT++A+     +PR+      D
Sbjct: 20  IHALPTYTVHWKCSIQQANTSSASSNQTVQPRQHAAPSSD 59


>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = -2

Query: 102 PLASMSKATSICGTPRGAGGMP 37
           PLA MS  TSI G   G GG P
Sbjct: 81  PLADMSAGTSIMGNNFGFGGFP 102


>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 554

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 174 PPDYWITICCSLPVPLSRADTCTMPLASMSKATSICGTPRGAGG 43
           P  YWIT   ++P+ L  A T     +++  A S+      AGG
Sbjct: 77  PSAYWITYIIAIPLQLISAATMAEVCSALPTAGSLYFWASAAGG 120


>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
           4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 636

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 382 SLKRTPLSRKNLEQPPDSCSRP 447
           SLK TP +R+  E PP S  +P
Sbjct: 21  SLKSTPKARETTEPPPPSSQQP 42


>SPAC1B3.17 |clr2||chromatin silencing protein
           Clr2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 537

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 262 ANQAEAVLHDTDTKMDEYKAHCRRTSVTNY 351
           +NQ +AV   +DT ++ Y+ HC++   + Y
Sbjct: 260 SNQMDAVKLISDTFVEPYQYHCKQLGNSRY 289


>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
           Brl2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 680

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 427 PDSCSRPALNCLNRLTRRWQLNAKEANTATAADGSDAEPR 546
           PD  S   L C+N   R      KE  T T++ G D E +
Sbjct: 189 PDRSSSFTLQCINESVRPQSTKVKEEAT-TSSKGKDEEKK 227


>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
           E3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 905

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 150 CCSLPVPLSRADTCTMPLASMSKATSICGTP 58
           C +LP P+ R  +   P   + K+   CG P
Sbjct: 794 CNNLPTPIQRGVSKAGPAKHLGKSCPHCGQP 824


>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 550

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +3

Query: 342 DKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAERE 497
           D   E+  K + L  +    E  EL     ++QQ    LFEQ  ++  +E E
Sbjct: 211 DHAHEQEIKDQSLRFESSLNEANELHGKLSKIQQEQEHLFEQRLREKVSEME 262


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,622,217
Number of Sequences: 5004
Number of extensions: 26620
Number of successful extensions: 135
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)