Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0570
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 99 3e-21
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 98 5e-21
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 94 1e-19
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 32 0.45
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 28 7.2
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 28 7.2
SB_23665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 27 9.6
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 140 bits (338), Expect = 1e-33
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ*SGGLSK 184
DNKLLGQF LVGIPPAPRGVPQ+EV FDIDANGIV+VSARDKGTG+EQQIVIQ SGGLSK
Sbjct: 258 DNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVIQSSGGLSK 317
Query: 185 DEIENMVKAAEQFAAADK 238
D IENM+K AE++A ADK
Sbjct: 318 DAIENMIKEAEKYAEADK 335
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +3
Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKM 482
Q + +KL+EE+ K+RE+LA KD E +R A +LQQ SLKLFE AYKK+
Sbjct: 336 QKKVEKLKEEIAKVREVLANKDNETGETIRQAYSELQQKSLKLFEMAYKKV 386
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 106 bits (255), Expect = 1e-23
Identities = 52/79 (65%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LLG+F L GIPPAPRGVPQI+V FD+D+NGI++VSA DK TGKE +I I G LS
Sbjct: 546 DNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLS 605
Query: 182 KDEIENMVKAAEQFAAADK 238
K++IE MVK AE+F AAD+
Sbjct: 606 KEDIERMVKEAEKFKAADE 624
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 98.7 bits (235), Expect = 3e-21
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 NKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLSK 184
N LLG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGKE +I I G LSK
Sbjct: 455 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 514
Query: 185 DEIENMVKAAEQFAAADK 238
++IE MV A ++ D+
Sbjct: 515 EDIERMVNEASKYKEEDE 532
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 98.3 bits (234), Expect = 5e-21
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 NKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLSK 184
N LLG+F L GIPPAPRGVPQIEV FDIDANGI++VSA+DK TGK I I G LSK
Sbjct: 454 NNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSK 513
Query: 185 DEIENMVKAAEQFAAADK 238
+EI+ M+ AE++ + D+
Sbjct: 514 EEIDRMINDAEKYKSEDE 531
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/79 (59%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LG+F L GIPPAPRGVPQIEV F+ID NGI+ VSA DKGTG +++I I L+
Sbjct: 1147 DNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLT 1206
Query: 182 KDEIENMVKAAEQFAAADK 238
++IE MV AE+FA DK
Sbjct: 1207 PEDIERMVNDAEKFADEDK 1225
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQ---LQQASLKLFEQAYKKMAAERE 497
+ EC LR+E+ KLR+ L+K+D +E+ + L++ ++ E+ K+ +A RE
Sbjct: 501 EKECKSLRDEVRKLRDNLSKQDLSRNDEVAGFLKERELLRKELRRITEELSKQESARRE 559
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +3
Query: 330 QDECDKLREEMNKLRELLAKKDTI------EPEELRTATGQLQQASLKLFEQAYKKMAAE 491
+ E + +E+ N++ ELL +KDT+ + L G+LQ+ L E +++A
Sbjct: 853 EKELSQFKEKTNQIEELLKEKDTVIDTANAKVSNLEETCGKLQKGLLSK-ESELAEVSAI 911
Query: 492 REGSQHS 512
R S+H+
Sbjct: 912 RSASEHN 918
>SB_33278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 925
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 95 ANGIVHVSARDKGTGKEQQIVIQ*SGGLSKDEIENMVKAAEQFAAADK 238
A+G+V++ R K K+ +V +K EIE KAAE A K
Sbjct: 471 ASGVVYIEVRPKVCRKKIDVVFAIELRTTKGEIEYQKKAAEDLVGAMK 518
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -2
Query: 114 TCTMPLASMSKATSICGTPRGAGGMPTSENCPSSLL 7
T + L + C P G PTS CPSS L
Sbjct: 1875 TSCLTLCTPDCPKKCCSKPTKVGSAPTSSQCPSSCL 1910
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQ 443
QDE + EE+ KLR +L ++D++ ELR+ Q+
Sbjct: 212 QDELNSKNEEIGKLRPMLTERDSM-IAELRSELATFQE 248
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 333 DECDKLREEMNKLRELLAKKDTIEPEELRT 422
D+ LRE+ +KLRE LAK + + + RT
Sbjct: 99 DQVKALREKCSKLREKLAKTEQEKEDHFRT 128
>SB_23665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 333 DECDKLREEMNKLRELLAKKDTIEPEELRT 422
D+ LRE+ +KLRE LAK + + + RT
Sbjct: 99 DQVKALREKCSKLREKLAKTEQEKEDHFRT 128
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 345 KLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAEREGSQHS 512
K +E+ R +L ++ TIE ELRT Q QA +++ ++ M+ + HS
Sbjct: 412 KKEDEIVSSRNVLEERYTIEINELRTRLEQEVQAKMEITKEMTLVMSEVVDLRNHS 467
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,829,751
Number of Sequences: 59808
Number of extensions: 221075
Number of successful extensions: 874
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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