Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0570
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   0.86 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.1  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 289 DTDTKMDEYKAHCRRTSVTNYARR*TNSVSCSLKRTPLSRKNLEQPPDSCSRPALNCLN 465
           D  + +D  +A  R  +  +YA+  T+ + C+    P    ++     SC+RPA  CL+
Sbjct: 402 DCQSPVDRQQACIRCGADGHYAKSCTSEIKCAACNGPHRIGHI-----SCARPAARCLH 455


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
 Frame = +1

Query: 271  AEAVLHDTDTKMDEYKAHCRRTSVTNYARR*TNSVSCSLKRTPLSRKNLEQPPDSCSRPA 450
            A+A+L +   ++D     C R  + N ARR T +V    ++    R ++       S   
Sbjct: 1030 AQAMLEEPANRLDPEAVRCTRNDLRNVARR-TQTVRQREEQCG-ERPSMPSSSPRTSERR 1087

Query: 451  LNCLNRLTR-RWQLNAKEANTATAADGSDAEPREEGGEEL 567
             N   R+ R R +    + +     +G D E  E    EL
Sbjct: 1088 ANIRARMARLRQRHRQHQQDERRGVEGGDIERGESVYPEL 1127


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 70  LRHAARRGRDAHQRELPQQL 11
           L+ A +  +D H+++LP+QL
Sbjct: 331 LQQAIKLSKDQHKQDLPEQL 350


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 138 PVPLSRADTCTMPLASMSKATSICGTPRGAGGMPTS 31
           P P S + + +   +S + +TS+CG   G GG   S
Sbjct: 790 PTPASLSSSSSS--SSSASSTSLCGGNGGGGGAGAS 823


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQ 467
           Q   ++L+ E+N+L    AK+D    +E+     Q QQ   KL ++
Sbjct: 715 QQRREQLQRELNELNSAYAKEDE-RLQEMTRKLHQRQQHMKKLQQE 759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,759
Number of Sequences: 2352
Number of extensions: 7613
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)