BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0570 (634 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 26 0.86 AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 1.5 AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 24 4.6 AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 6.1 AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 6.1 >AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein protein. Length = 455 Score = 26.2 bits (55), Expect = 0.86 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = +1 Query: 289 DTDTKMDEYKAHCRRTSVTNYARR*TNSVSCSLKRTPLSRKNLEQPPDSCSRPALNCLN 465 D + +D +A R + +YA+ T+ + C+ P ++ SC+RPA CL+ Sbjct: 402 DCQSPVDRQQACIRCGADGHYAKSCTSEIKCAACNGPHRIGHI-----SCARPAARCLH 455 >AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase protein. Length = 1154 Score = 25.4 bits (53), Expect = 1.5 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 1/100 (1%) Frame = +1 Query: 271 AEAVLHDTDTKMDEYKAHCRRTSVTNYARR*TNSVSCSLKRTPLSRKNLEQPPDSCSRPA 450 A+A+L + ++D C R + N ARR T +V ++ R ++ S Sbjct: 1030 AQAMLEEPANRLDPEAVRCTRNDLRNVARR-TQTVRQREEQCG-ERPSMPSSSPRTSERR 1087 Query: 451 LNCLNRLTR-RWQLNAKEANTATAADGSDAEPREEGGEEL 567 N R+ R R + + + +G D E E EL Sbjct: 1088 ANIRARMARLRQRHRQHQQDERRGVEGGDIERGESVYPEL 1127 >AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase protein. Length = 988 Score = 23.8 bits (49), Expect = 4.6 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = -1 Query: 70 LRHAARRGRDAHQRELPQQL 11 L+ A + +D H+++LP+QL Sbjct: 331 LQQAIKLSKDQHKQDLPEQL 350 >AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific transcription factor FRU-MA protein. Length = 960 Score = 23.4 bits (48), Expect = 6.1 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -2 Query: 138 PVPLSRADTCTMPLASMSKATSICGTPRGAGGMPTS 31 P P S + + + +S + +TS+CG G GG S Sbjct: 790 PTPASLSSSSSS--SSSASSTSLCGGNGGGGGAGAS 823 >AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. Length = 1133 Score = 23.4 bits (48), Expect = 6.1 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +3 Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQ 467 Q ++L+ E+N+L AK+D +E+ Q QQ KL ++ Sbjct: 715 QQRREQLQRELNELNSAYAKEDE-RLQEMTRKLHQRQQHMKKLQQE 759 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 419,759 Number of Sequences: 2352 Number of extensions: 7613 Number of successful extensions: 20 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 61886940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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