Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0570
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 136 1e-32
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 105 3e-23
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 101 4e-22
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 97 1e-20
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 96 2e-20
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 95 3e-20
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 95 3e-20
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 95 4e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 95 4e-20
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 30 1.6
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 30 1.6
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 30 1.6
U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.8
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 29 3.7
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 29 3.7
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 28 6.4
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 28 6.4
U80451-6|AAY55867.1| 200|Caenorhabditis elegans Hypothetical pr... 28 6.4
U50192-1|AAZ94735.1| 161|Caenorhabditis elegans Hypothetical pr... 28 6.4
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 28 6.4
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 28 6.4
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 28 6.4
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 28 6.4
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 28 6.4
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 136 bits (329), Expect = 1e-32
Identities = 65/78 (83%), Positives = 72/78 (92%)
Frame = +2
Query: 2 SDNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ*SGGLS 181
+ NKLLGQFSLVGIPPAPRGVPQ+EV FDIDANGIV+VSARD+GTGKEQQIVIQ SGGLS
Sbjct: 474 TSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLS 533
Query: 182 KDEIENMVKAAEQFAAAD 235
KD+IENM+K AE+ AA D
Sbjct: 534 KDQIENMIKEAEKNAAED 551
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +3
Query: 324 LPQDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAEREG 500
LP+DEC+ LR ++ +++L KD PE ++ A LQQ SLKLFE AYK MAA+ G
Sbjct: 582 LPKDECEALRTKIADTKKILDNKDNETPEAIKEACNTLQQQSLKLFEAAYKNMAAKNSG 640
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 259 VANQAEAVLHDTDTKMDEY 315
V NQAE ++HDT+ KM E+
Sbjct: 560 VINQAEGIIHDTEAKMTEF 578
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 105 bits (251), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LLG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK+ +I I G LS
Sbjct: 453 DNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLS 512
Query: 182 KDEIENMVKAAEQFAAADK 238
KD+IE MV AE++ A D+
Sbjct: 513 KDDIERMVNEAEKYKADDE 531
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 101 bits (242), Expect = 4e-22
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LLG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK +QI I S
Sbjct: 453 DNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFS 512
Query: 182 KDEIENMVKAAEQFAAADK 238
KD+IE MV AE++ A D+
Sbjct: 513 KDDIERMVNEAEKYKADDE 531
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LG+F L G+PPAPRGVPQIEV F+ID NGI+HV+A DKGTG + +I I LS
Sbjct: 480 DNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLS 539
Query: 182 KDEIENMVKAAEQFAAADK 238
++IE M+ AE+FA DK
Sbjct: 540 PEDIERMINDAEKFAEDDK 558
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LG+F L G+PPAPRGVPQIEV F+ID NGI+HV+A DKGTG + +I I LS
Sbjct: 480 DNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLS 539
Query: 182 KDEIENMVKAAEQFAAADK 238
++IE M+ AE+FA DK
Sbjct: 540 PEDIEAMINDAEKFAEDDK 558
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ-*SGGLS 181
DN LG F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK +I IQ G L+
Sbjct: 453 DNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLT 512
Query: 182 KDEIENMVKAAEQFAAAD 235
+ +I+ MV A+QF D
Sbjct: 513 QSDIDRMVHEAKQFEKED 530
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ-*SGGLS 181
DN LG F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGK +I IQ G L+
Sbjct: 453 DNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLT 512
Query: 182 KDEIENMVKAAEQFAAAD 235
+ +I+ MV A+QF D
Sbjct: 513 QSDIDRMVHEAKQFEKED 530
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LG F + GIPPAPRGVPQIEV F+ID NGI+HVSA DKGTG + ++ I LS
Sbjct: 108 DNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLS 167
Query: 182 KDEIENMVKAAEQFAAADK 238
++IE M+ A++FAA D+
Sbjct: 168 PEDIERMINDADKFAADDQ 186
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVI-Q*SGGLS 181
DN LG F + GIPPAPRGVPQIEV F+ID NGI+HVSA DKGTG + ++ I LS
Sbjct: 477 DNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLS 536
Query: 182 KDEIENMVKAAEQFAAADK 238
++IE M+ A++FAA D+
Sbjct: 537 PEDIERMINDADKFAADDQ 555
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 DNKLLGQFSLVGIPPAPRGVPQIEVAFDIDANGIVHVSARDKGTGKEQQIVIQ-*SGGLS 181
DN LG F L GIPPAPRGVPQ++V FDIDANGI++VSA DK TG+ +I I+ G LS
Sbjct: 453 DNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLS 512
Query: 182 KDEIENMVKAAEQFAAAD 235
+ +I+ MV A+QF D
Sbjct: 513 QADIDRMVNEAKQFERED 530
>Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical
protein F54C9.11 protein.
Length = 328
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 333 DECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYK 476
+E +++ E+ R LA+KD + T ++Q+ + KLF++AYK
Sbjct: 49 EELLRMQAELRATRTALAEKDKKMTQIQVTVDAEVQELTEKLFQEAYK 96
>Z68303-6|CAD89754.1| 708|Caenorhabditis elegans Hypothetical
protein ZK809.5b protein.
Length = 708
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 351 REEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAERE 497
+E K R+ +K +E EELR +++ ASLK ++ MA E E
Sbjct: 190 KENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEAE 238
>Z68303-5|CAA92639.2| 706|Caenorhabditis elegans Hypothetical
protein ZK809.5a protein.
Length = 706
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 351 REEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAERE 497
+E K R+ +K +E EELR +++ ASLK ++ MA E E
Sbjct: 188 KENFEKCRDEWQRKMELEMEELRLERERIEVASLKSTDKRRSDMAIEAE 236
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 327 PQDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAER 494
PQ +C K+ EEM K+ E ++ +E E + + + Q E+AY K++AER
Sbjct: 845 PQLKCGKMAEEMIKMAE---EQKVLEAEAKKAESARKSQ------EEAYAKLSAER 891
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 327 PQDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAER 494
PQ +C K+ EEM K+ E ++ +E E + + + Q E+AY K++AER
Sbjct: 845 PQLKCGKMAEEMIKMAE---EQKVLEAEAKKAESARKSQ------EEAYAKLSAER 891
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 327 PQDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAER 494
PQ +C K+ EEM K+ E ++ +E E + + + Q E+AY K++AER
Sbjct: 845 PQLKCGKMAEEMIKMAE---EQKVLEAEAKKAESARKSQ------EEAYAKLSAER 891
>U12965-1|AAA20611.1| 176|Caenorhabditis elegans Hypothetical
protein F23F12.9a protein.
Length = 176
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 345 KLREEMNKLR-ELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAERE 497
K RE+ N+ ELL +K+ EEL+ A +L Q + + + + ++ A RE
Sbjct: 87 KHREQKNQTENELLKRKNAALEEELKQAKCELAQMQITIRDMSIEREAYRRE 138
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 321 ALPQDECDKLREEMNKLRELLAKKDTIE 404
+LP +E DK+RE++N LR + D E
Sbjct: 2384 SLPTEEADKIREKINDLRRRKQESDLAE 2411
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 321 ALPQDECDKLREEMNKLRELLAKKDTIE 404
+LP +E DK+RE++N LR + D E
Sbjct: 2442 SLPAEESDKIREKINDLRRRKQESDLAE 2469
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 321 ALPQDECDKLREEMNKLRELLAKKDTIE 404
+LP +E DK+RE++N LR + D E
Sbjct: 2500 SLPAEESDKIREKINDLRRRKQESDQAE 2527
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 321 ALPQDECDKLREEMNKLRELLAKKDTIE 404
+LP +E D++RE++N+LR + D E
Sbjct: 2326 SLPAEESDEIREKLNELRRRKQESDQAE 2353
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 348 LRE-EMNKLRELLAKKDT---IEPEELRTATGQLQQASLKLFEQAYKKMAAEREGSQH 509
+RE EM KLR+ ++KKD+ + EEL A Q +L E+ + + E E +H
Sbjct: 162 MREGEMMKLRDEISKKDSNMKVIKEELEAARKAQSQENLDDLEKTVQNLKVEIEKLKH 219
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 348 LRE-EMNKLRELLAKKDT---IEPEELRTATGQLQQASLKLFEQAYKKMAAEREGSQH 509
+RE EM KLR+ ++KKD+ + EEL A Q +L E+ + + E E +H
Sbjct: 162 MREGEMMKLRDEISKKDSNMKVIKEELEAARKAQSQENLDDLEKTVQNLKVEIEKLKH 219
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 330 QDECDKLREEMNKLRELLAKKDTIEPEELRTATGQLQQASLKLFEQAYKKMAAERE 497
+DE K++++ K +LLA+K E L+ T + A + K A E+E
Sbjct: 2803 RDEVAKMQKKAGKKSKLLAEKQAEADEALKAITESMSGAEDQKLSMEQLKAATEKE 2858
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 75 SICGTPRGAGGMPTS 31
S CGTP+ AGG PTS
Sbjct: 134 SNCGTPQSAGGPPTS 148
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 75 SICGTPRGAGGMPTS 31
S CGTP+ AGG PTS
Sbjct: 132 SNCGTPQSAGGPPTS 146
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 2 SDNKLLGQFSLVGI 43
+ NKLLGQFSLVGI
Sbjct: 474 TSNKLLGQFSLVGI 487
>U80451-6|AAY55867.1| 200|Caenorhabditis elegans Hypothetical
protein F11G11.14 protein.
Length = 200
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 138 PVPLSRADTCTMPLASMSKATSICGTPRGAGGMPTSENCPS 16
P+ A TC + ++SK +S+ T A G PTS PS
Sbjct: 137 PMTPKAASTCKTQMTTISKVSSMNKTKTCAIGPPTSPPSPS 177
>U50192-1|AAZ94735.1| 161|Caenorhabditis elegans Hypothetical
protein T23B7.2 protein.
Length = 161
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 138 PVPLSRADTCTMPLASMSKATSICGTPRGAGGMPTSENCPS 16
P+ A TC + ++SK +S+ T A G PTS PS
Sbjct: 105 PMTPKAASTCKTQMTTISKVSSMNKTKTCAIGPPTSPPSPS 145
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 108 TMPLASMSKATSICGTPRGAGGMPTSENCPSS 13
T+P AS S AT + GTP GAG P + SS
Sbjct: 193 TLPNAS-SAATPLSGTPGGAGPQPMTMPSTSS 223
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 108 TMPLASMSKATSICGTPRGAGGMPTSENCPSS 13
T+P AS S AT + GTP GAG P + SS
Sbjct: 268 TLPNAS-SAATPLSGTPGGAGPQPMTMPSTSS 298
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 108 TMPLASMSKATSICGTPRGAGGMPTSENCPSS 13
T+P AS S AT + GTP GAG P + SS
Sbjct: 202 TLPNAS-SAATPLSGTPGGAGPQPMTMPSTSS 232
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 108 TMPLASMSKATSICGTPRGAGGMPTSENCPSS 13
T+P AS S AT + GTP GAG P + SS
Sbjct: 346 TLPNAS-SAATPLSGTPGGAGPQPMTMPSTSS 376
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 108 TMPLASMSKATSICGTPRGAGGMPTSENCPSS 13
T+P AS S AT + GTP GAG P + SS
Sbjct: 193 TLPNAS-SAATPLSGTPGGAGPQPMTMPSTSS 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,453,163
Number of Sequences: 27780
Number of extensions: 168815
Number of successful extensions: 751
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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