Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0570
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.9  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -3

Query: 422  CSKFFRLNGVLFSEQLTEFVHLLA*FVTLVLRQCALYSSILVSVSCSTASAW 267
            CS +F   GV+ S  +++++ L+A  ++ VL    L   +L  V   +  AW
Sbjct: 976  CSDYFSQGGVIESIMVSDYLPLVAATLSGVL--VLLVIIVLAFVFRESVGAW 1025


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 60  PRGAGGMPTS 31
           PRG GG+PTS
Sbjct: 399 PRGPGGVPTS 408


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 321 ALPQDECDKLREEMN 365
           AL QD   KLREE+N
Sbjct: 321 ALNQDVQKKLREEIN 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,884
Number of Sequences: 438
Number of extensions: 1985
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)