Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0566
         (657 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:...    38   0.28 
UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2; ...    37   0.37 

>UniRef50_Q5TT44 Cluster: ENSANGP00000026958; n=2; Culicidae|Rep:
           ENSANGP00000026958 - Anopheles gambiae str. PEST
          Length = 537

 Score = 37.5 bits (83), Expect = 0.28
 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = +3

Query: 582 NAGNNYHSVF-GEGGDTSTPPLLDLS 656
           N+ NNYH VF G   +T TPPLLDLS
Sbjct: 140 NSINNYHGVFDGSAAETGTPPLLDLS 165


>UniRef50_Q16NB2 Cluster: Putative uncharacterized protein; n=2;
           Endopterygota|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 513

 Score = 37.1 bits (82), Expect = 0.37
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +3

Query: 582 NAGNNYHSVFGEG-GDTSTPPLLDLS 656
           N+ NN+HSVF  G  +T TPPLLDLS
Sbjct: 157 NSINNFHSVFDNGTAETGTPPLLDLS 182


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,634,690
Number of Sequences: 1657284
Number of extensions: 10161159
Number of successful extensions: 24846
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24838
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)