Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0566
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.         30   2.4  
BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p pro...    30   2.4  
AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p pro...    30   2.4  
AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,...    30   2.4  
AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,...    30   2.4  

>U75467-2|AAB18342.1|  579|Drosophila melanogaster Rga protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALRGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 AP 454
           AP
Sbjct: 59  AP 60



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 591 NNYHSVFGEGG--DTSTPPLLD 650
           NN+H VFG GG  DTSTP LLD
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLD 161


>BT025208-1|ABF17899.1|  585|Drosophila melanogaster FI01108p
           protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 AP 454
           AP
Sbjct: 59  AP 60



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 591 NNYHSVFGEGG--DTSTPPLLD 650
           NN+H VFG GG  DTSTP LLD
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLD 161


>AY094772-1|AAM11125.1|  585|Drosophila melanogaster GM14102p
           protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 AP 454
           AP
Sbjct: 59  AP 60



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 591 NNYHSVFGEGG--DTSTPPLLD 650
           NN+H VFG GG  DTSTP LLD
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLD 161


>AE014297-302|AAF51992.2|  585|Drosophila melanogaster CG2161-PA,
           isoform A protein.
          Length = 585

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 AP 454
           AP
Sbjct: 59  AP 60



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 591 NNYHSVFGEGG--DTSTPPLLD 650
           NN+H VFG GG  DTSTP LLD
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLD 161


>AE014297-301|AAN13250.1|  579|Drosophila melanogaster CG2161-PB,
           isoform B protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 278 MANLNFQQVPRSLAXXXXXXXXXXXXXXXXXXXXXHVTPTFGGALSPGRNS---TAMPGG 448
           MANLNFQQ PRS+A                     HVTPT G   +   NS   TA  G 
Sbjct: 1   MANLNFQQPPRSIA--NAALAGRTTGGFGGSSLAGHVTPTSGMFQTDFANSYPGTANYGQ 58

Query: 449 AP 454
           AP
Sbjct: 59  AP 60



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +3

Query: 591 NNYHSVFGEGG--DTSTPPLLD 650
           NN+H VFG GG  DTSTP LLD
Sbjct: 141 NNFH-VFGGGGGSDTSTPALLD 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,724,999
Number of Sequences: 53049
Number of extensions: 492249
Number of successful extensions: 1305
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)