Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0565
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 130 1e-30
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 34 0.092
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 33 0.28
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 33 0.28
Z82088-3|CAF32230.1| 978|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82088-1|CAB05000.2| 901|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81490-5|CAF32231.1| 978|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81490-3|CAB04015.2| 901|Caenorhabditis elegans Hypothetical pr... 29 4.6
AJ303082-1|CAC19896.1| 901|Caenorhabditis elegans PMR1 protein ... 29 4.6
AJ303081-1|CAC19895.1| 901|Caenorhabditis elegans PMR1 protein ... 29 4.6
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 6.0
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 6.0
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 28 6.0
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 28 6.0
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 28 6.0
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 28 6.0
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 6.0
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical protein
K11D9.2b protein.
Length = 1004
Score = 130 bits (313), Expect = 1e-30
Identities = 55/84 (65%), Positives = 71/84 (84%)
Frame = +2
Query: 257 DCKVFTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFV 436
DC VF D HP MALSVLVTIEMLNA+NSLSENQSL+ MPPW N+WL+ +++LS +LHFV
Sbjct: 888 DCAVFEDNHPNAMALSVLVTIEMLNAINSLSENQSLLVMPPWKNIWLMAAISLSMSLHFV 947
Query: 437 ILYVEVLSAVFQVTPLSLDEWVTV 508
ILYV++++ +FQ+TPL+ EW+ V
Sbjct: 948 ILYVDIMATIFQITPLNWVEWIAV 971
Score = 106 bits (254), Expect = 2e-23
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +3
Query: 3 LPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXXXXXXXXXXXXXXSWWFMYSPY 182
LPATALGFNPPDLDIMD+ PR A++GLISGWLFFRY+ WWF+
Sbjct: 803 LPATALGFNPPDLDIMDRHPRSANDGLISGWLFFRYLAVGTYVGVATVGASMWWFLLYEE 862
Query: 183 GPQMTYWQLTHHLQCISGGDEFKGL 257
GPQ+TY+QLTH ++C D F L
Sbjct: 863 GPQITYYQLTHWMRCEIEPDNFADL 887
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 508 MKFSVPVVLLDEVLKFVARKISDGE 582
+K S+PV+LLDE+LKF+AR D E
Sbjct: 972 LKISLPVLLLDEILKFIARNYIDVE 996
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical protein
K11D9.2a protein.
Length = 1059
Score = 130 bits (313), Expect = 1e-30
Identities = 55/84 (65%), Positives = 71/84 (84%)
Frame = +2
Query: 257 DCKVFTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFV 436
DC VF D HP MALSVLVTIEMLNA+NSLSENQSL+ MPPW N+WL+ +++LS +LHFV
Sbjct: 888 DCAVFEDNHPNAMALSVLVTIEMLNAINSLSENQSLLVMPPWKNIWLMAAISLSMSLHFV 947
Query: 437 ILYVEVLSAVFQVTPLSLDEWVTV 508
ILYV++++ +FQ+TPL+ EW+ V
Sbjct: 948 ILYVDIMATIFQITPLNWVEWIAV 971
Score = 106 bits (254), Expect = 2e-23
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +3
Query: 3 LPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXXXXXXXXXXXXXXSWWFMYSPY 182
LPATALGFNPPDLDIMD+ PR A++GLISGWLFFRY+ WWF+
Sbjct: 803 LPATALGFNPPDLDIMDRHPRSANDGLISGWLFFRYLAVGTYVGVATVGASMWWFLLYEE 862
Query: 183 GPQMTYWQLTHHLQCISGGDEFKGL 257
GPQ+TY+QLTH ++C D F L
Sbjct: 863 GPQITYYQLTHWMRCEIEPDNFADL 887
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 508 MKFSVPVVLLDEVLKFVARKISDGETRTV 594
+K S+PV+LLDE+LKF+AR DG+ TV
Sbjct: 972 LKISLPVLLLDEILKFIARNYIDGKPETV 1000
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 130 bits (313), Expect = 1e-30
Identities = 55/84 (65%), Positives = 71/84 (84%)
Frame = +2
Query: 257 DCKVFTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFV 436
DC VF D HP MALSVLVTIEMLNA+NSLSENQSL+ MPPW N+WL+ +++LS +LHFV
Sbjct: 888 DCAVFEDNHPNAMALSVLVTIEMLNAINSLSENQSLLVMPPWKNIWLMAAISLSMSLHFV 947
Query: 437 ILYVEVLSAVFQVTPLSLDEWVTV 508
ILYV++++ +FQ+TPL+ EW+ V
Sbjct: 948 ILYVDIMATIFQITPLNWVEWIAV 971
Score = 106 bits (254), Expect = 2e-23
Identities = 47/85 (55%), Positives = 56/85 (65%)
Frame = +3
Query: 3 LPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXXXXXXXXXXXXXXSWWFMYSPY 182
LPATALGFNPPDLDIMD+ PR A++GLISGWLFFRY+ WWF+
Sbjct: 803 LPATALGFNPPDLDIMDRHPRSANDGLISGWLFFRYLAVGTYVGVATVGASMWWFLLYEE 862
Query: 183 GPQMTYWQLTHHLQCISGGDEFKGL 257
GPQ+TY+QLTH ++C D F L
Sbjct: 863 GPQITYYQLTHWMRCEIEPDNFADL 887
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 508 MKFSVPVVLLDEVLKFVARKISDGETRTV 594
+K S+PV+LLDE+LKF+AR DG+ TV
Sbjct: 972 LKISLPVLLLDEILKFIARNYIDGKPETV 1000
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS-GWLFFRYM 113
PA +L + P+ DIM +PPRK D L++ G + + Y+
Sbjct: 846 PAVSLAYEGPEADIMLQPPRKKDTHLVTKGLITYTYL 882
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS-GWLFFRYM 113
PA +L + P+ DIM +PPRK + L++ G + + Y+
Sbjct: 850 PAVSLAYEGPEADIMLQPPRKRETHLVTKGLITYTYL 886
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS-GWLFFRYM 113
PA +L + P+ DIM +PPRK + L++ G + + Y+
Sbjct: 850 PAVSLAYEGPEADIMLQPPRKRETHLVTKGLITYTYL 886
>Z82088-3|CAF32230.1| 978|Caenorhabditis elegans Hypothetical protein
ZK256.1c protein.
Length = 978
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 868 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 927
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 928 QHIFQTEALSL 938
>Z82088-1|CAB05000.2| 901|Caenorhabditis elegans Hypothetical protein
ZK256.1a protein.
Length = 901
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 791 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 850
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 851 QHIFQTEALSL 861
>Z81490-5|CAF32231.1| 978|Caenorhabditis elegans Hypothetical protein
ZK256.1c protein.
Length = 978
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 868 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 927
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 928 QHIFQTEALSL 938
>Z81490-3|CAB04015.2| 901|Caenorhabditis elegans Hypothetical protein
ZK256.1a protein.
Length = 901
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 791 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 850
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 851 QHIFQTEALSL 861
>AJ303082-1|CAC19896.1| 901|Caenorhabditis elegans PMR1 protein
protein.
Length = 901
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 791 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 850
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 851 QHIFQTEALSL 861
>AJ303081-1|CAC19895.1| 901|Caenorhabditis elegans PMR1 protein
protein.
Length = 901
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = +2
Query: 278 PHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYVEVL 457
P TM + V +M NA++ S + + + N +++ S +++Y L
Sbjct: 791 PRDTTMTFTCFVLFDMWNALSCRSSRKMIWQIGLRRNRMFSLAVSASLICQLLVIYWAPL 850
Query: 458 SAVFQVTPLSL 490
+FQ LSL
Sbjct: 851 QHIFQTEALSL 861
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 448 DVEDDEMKSEGERHGADEPQ 389
D E +E + EGE HG DEP+
Sbjct: 728 DEEFEEGEDEGEEHGMDEPE 747
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 448 DVEDDEMKSEGERHGADEPQ 389
D E +E + EGE HG DEP+
Sbjct: 728 DEEFEEGEDEGEEHGMDEPE 747
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS 89
PA +L + P+ DIM PPR L+S
Sbjct: 917 PAISLAYEQPENDIMHTPPRSRTARLLS 944
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS 89
PA +L + P+ DIM PPR L+S
Sbjct: 917 PAISLAYEQPENDIMHTPPRSRTARLLS 944
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS 89
PA +L + P+ DIM PPR L+S
Sbjct: 917 PAISLAYEQPENDIMHTPPRSRTARLLS 944
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 6 PATALGFNPPDLDIMDKPPRKADEGLIS 89
PA +L + P+ DIM PPR L+S
Sbjct: 917 PAISLAYEQPENDIMHTPPRSRTARLLS 944
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 448 DVEDDEMKSEGERHGADEPQ 389
D E +E + EGE HG DEP+
Sbjct: 728 DEEFEEGEDEGEEHGMDEPE 747
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,310,766
Number of Sequences: 27780
Number of extensions: 366157
Number of successful extensions: 1033
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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