BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0564 (424 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1620.06c |||ribose-phosphate pyrophosphokinase |Schizosaccha... 44 7e-06 SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 43 2e-05 SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 36 0.003 SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 28 0.69 SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 2.8 SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 3.7 SPAC5H10.08c |pan6||pantoate-beta-alanine ligase |Schizosaccharo... 25 4.8 SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 25 6.4 >SPCC1620.06c |||ribose-phosphate pyrophosphokinase |Schizosaccharomyces pombe|chr 3|||Manual Length = 321 Score = 44.4 bits (100), Expect = 7e-06 Identities = 21/56 (37%), Positives = 36/56 (64%) Frame = +1 Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423 PELA+ +A R+ + G +V +N ET V I ES+R ++++I+QTG + ++M Sbjct: 15 PELAEKVARRIGLSLGKVAVVQYSNRETSVTIGESVRDEDVFILQTGCGSINDHLM 70 >SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 409 Score = 43.2 bits (97), Expect = 2e-05 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = +1 Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423 PEL LI+ RL + S+ N ET VEI ES+R K+++I+Q+G++ V ++M Sbjct: 13 PELLHLISNRLGITPCDVSLKRFANGETSVEIRESVRDKDVFILQSGSSTVNDSLM 68 >SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 341 Score = 35.9 bits (79), Expect = 0.003 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +1 Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423 P+L + I LC+ G + +N ET V I +S+RG ++YI+ + V ++M Sbjct: 13 PKLTESICEHLCLDIGRVELSKFSNGETSVRIKQSVRGCDVYIVSPASGQVNDHLM 68 >SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transaminase |Schizosaccharomyces pombe|chr 2|||Manual Length = 696 Score = 27.9 bits (59), Expect = 0.69 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 258 RSEFPLKIPMSDVEFPSILQF*DLFDKPTNLKPTIS 151 +SE LK+ DVEFP + KPT+L P S Sbjct: 202 KSEQKLKVDFVDVEFPEPAEGLPGTPKPTSLHPVFS 237 >SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosaccharomyces pombe|chr 1|||Manual Length = 468 Score = 25.8 bits (54), Expect = 2.8 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +1 Query: 247 KLTPE--LADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYI 384 KLTPE L D+ + C V T I+ I +SI GKN I Sbjct: 348 KLTPEQRLVDVTVSERALVGADCMVNEGTTIKDNSNIKKSIIGKNCVI 395 >SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 449 Score = 25.4 bits (53), Expect = 3.7 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 Query: 100 LNKLFSTFTNIIIKKPSGY 156 L L+S FT++ IK P G+ Sbjct: 24 LKSLYSDFTSLFIKNPEGF 42 >SPAC5H10.08c |pan6||pantoate-beta-alanine ligase |Schizosaccharomyces pombe|chr 1|||Manual Length = 283 Score = 25.0 bits (52), Expect = 4.8 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 200 NFEIYSINPPT*SQLYPEGFLMIIFVNV 117 N + + PT +LYPEG I FV+V Sbjct: 84 NLGVDLVYAPTVEELYPEGSQDITFVDV 111 >SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Schizosaccharomyces pombe|chr 1|||Manual Length = 729 Score = 24.6 bits (51), Expect = 6.4 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 64 SEKTRENTSFTSNSHISP 11 S K RE T SN H+SP Sbjct: 237 SYKQREKTRLESNGHVSP 254 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,846,206 Number of Sequences: 5004 Number of extensions: 37216 Number of successful extensions: 75 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 75 length of database: 2,362,478 effective HSP length: 66 effective length of database: 2,032,214 effective search space used: 150383836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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