BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0564 (424 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0164 - 22847641-22847834,22848033-22848288,22848634-22849266 29 2.0 06_03_0763 - 24405525-24405701,24406209-24406368,24406924-244070... 28 2.7 12_01_0622 + 5124213-5125292,5126820-5128685 27 8.2 01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 27 8.2 >05_05_0164 - 22847641-22847834,22848033-22848288,22848634-22849266 Length = 360 Score = 28.7 bits (61), Expect = 2.0 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +1 Query: 352 AESIRGKNIYIIQTGTNDV 408 ++ I GK++Y+I GTNDV Sbjct: 161 SDEIAGKSLYVISAGTNDV 179 >06_03_0763 - 24405525-24405701,24406209-24406368,24406924-24407005, 24407098-24407167,24407443-24407607,24407731-24407874, 24408467-24408715,24409006-24409221,24409306-24409398 Length = 451 Score = 28.3 bits (60), Expect = 2.7 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = +1 Query: 262 LADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423 LA IA L V G + + E V++ ES+RG +++++Q + V N+M Sbjct: 101 LAQEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPTCSPVNENLM 154 >12_01_0622 + 5124213-5125292,5126820-5128685 Length = 981 Score = 26.6 bits (56), Expect = 8.2 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +1 Query: 52 WFFQIKYLTA*TFNCLLNKLFSTFTNIIIKKPSGYSWLQVG 174 W Q++ L +CLL+ F+ + I P+G SWL+ G Sbjct: 78 WVKQVRDLAYDIEDCLLD--FALYAARISSSPTGSSWLRPG 116 >01_05_0359 + 21350580-21350829,21350990-21351064,21351156-21351236, 21352633-21352830,21352930-21353019,21353096-21353253, 21353350-21353472,21354989-21355096,21355530-21355826 Length = 459 Score = 26.6 bits (56), Expect = 8.2 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = -2 Query: 225 DVEFPSILQF*DLFDKPTNLKPTISRRFFNDNICE 121 DVE S++ D+ D LK T+ R ND C+ Sbjct: 44 DVELISLITITDILDNEGILKKTMKRGVGNDKPCD 78 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,934,914 Number of Sequences: 37544 Number of extensions: 210520 Number of successful extensions: 402 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 402 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 778540620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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