Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0564
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical pr... 60 6e-10
U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 29 1.8
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 29 1.8
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 29 1.8
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 29 1.8
Z68220-2|CAA92485.1| 234|Caenorhabditis elegans Hypothetical pr... 27 5.5
>Z68014-5|CAA92027.1| 353|Caenorhabditis elegans Hypothetical
protein W04G3.5 protein.
Length = 353
Score = 60.1 bits (139), Expect = 6e-10
Identities = 26/56 (46%), Positives = 44/56 (78%)
Frame = +1
Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423
PELA +++ RL +R G +VY+KTN ET V+I +S+RGK+++I+Q+G+ +V ++M
Sbjct: 20 PELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNNDVM 75
>U00036-8|AAL06052.1| 318|Caenorhabditis elegans Hypothetical
protein R151.2c protein.
Length = 318
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423
P+L+ I RL + S+ +N ET VEI ES+RG+++YIIQ+ ++ N+M
Sbjct: 12 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLM 67
>U00036-7|AAK29858.2| 319|Caenorhabditis elegans Hypothetical
protein R151.2b protein.
Length = 319
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423
P+L+ I RL + S+ +N ET VEI ES+RG+++YIIQ+ ++ N+M
Sbjct: 13 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLM 68
>U00036-6|AAK29853.1| 377|Caenorhabditis elegans Hypothetical
protein R151.2a protein.
Length = 377
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423
P+L+ I RL + S+ +N ET VEI ES+RG+++YIIQ+ ++ N+M
Sbjct: 71 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLM 126
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 256 PELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFNIM 423
P+L+ I RL + S+ +N ET VEI ES+RG+++YIIQ+ ++ N+M
Sbjct: 140 PDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEINDNLM 195
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 334 ETIVEIAESIRGKNIYIIQTGTNDVFFN 417
ETI+E E G N Y+I GT DV+ N
Sbjct: 115 ETIIEQGEE--GDNFYVIDKGTVDVYVN 140
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 334 ETIVEIAESIRGKNIYIIQTGTNDVFFN 417
ETI+E E G N Y+I GT DV+ N
Sbjct: 147 ETIIEQGEE--GDNFYVIDKGTVDVYVN 172
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 334 ETIVEIAESIRGKNIYIIQTGTNDVFFN 417
ETI+E E G N Y+I GT DV+ N
Sbjct: 157 ETIIEQGEE--GDNFYVIDKGTVDVYVN 182
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 334 ETIVEIAESIRGKNIYIIQTGTNDVFFN 417
ETI+E E G N Y+I GT DV+ N
Sbjct: 157 ETIIEQGEE--GDNFYVIDKGTVDVYVN 182
>Z68220-2|CAA92485.1| 234|Caenorhabditis elegans Hypothetical
protein T20D3.2 protein.
Length = 234
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 70 YLTA*TFNCLLNKLFSTFTNII--IKKPSGYSWLQVGGFIE*ISK 198
Y T LLNK F+N ++ G W+ VGGF E +S+
Sbjct: 110 YYTCMNLYTLLNKPQPDFSNTFDYVRTFRGLEWMCVGGFSEVVSQ 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,979,765
Number of Sequences: 27780
Number of extensions: 200939
Number of successful extensions: 466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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