BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0564 (424 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.9 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 1.9 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.3 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 3.3 DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 4.3 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 5.7 AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 21 5.7 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 10.0 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 10.0 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 22.6 bits (46), Expect = 1.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 238 FEWKLTPELADLIAIRLC 291 FE K P DL A+RLC Sbjct: 172 FEHKRQPTSIDLNAVRLC 189 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 22.6 bits (46), Expect = 1.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 238 FEWKLTPELADLIAIRLC 291 FE K P DL A+RLC Sbjct: 172 FEHKRQPTSIDLNAVRLC 189 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.8 bits (44), Expect = 3.3 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 16 KYVSLM*MKYFLWFFQIKYL 75 KYV+++ + FLW F + L Sbjct: 512 KYVAMVLDRLFLWIFTLAVL 531 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.8 bits (44), Expect = 3.3 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 16 KYVSLM*MKYFLWFFQIKYL 75 KYV+++ + FLW F + L Sbjct: 512 KYVAMVLDRLFLWIFTLAVL 531 >DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine receptor alpha1subunit protein. Length = 601 Score = 21.4 bits (43), Expect = 4.3 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +1 Query: 16 KYVSLM*MKYFLWFFQI 66 KYV+++ + FLW F + Sbjct: 540 KYVAMVLDRIFLWIFTV 556 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 21.0 bits (42), Expect = 5.7 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +1 Query: 16 KYVSLM*MKYFLWFFQI 66 KYV+++ + FLW F + Sbjct: 507 KYVAMVLDRLFLWIFTL 523 >AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase protein. Length = 342 Score = 21.0 bits (42), Expect = 5.7 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = -3 Query: 59 KNQRKYFIHIKLTYF 15 +NQ++++ HI L YF Sbjct: 2 ENQKEHYRHILLFYF 16 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 20.2 bits (40), Expect = 10.0 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -2 Query: 372 LATN*LSNFHNGLYVSL 322 L N +SNF+NG + +L Sbjct: 461 LGENRISNFYNGSFRNL 477 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 20.2 bits (40), Expect = 10.0 Identities = 10/34 (29%), Positives = 14/34 (41%) Frame = -3 Query: 326 VLWYTEQPPLRTHRRMAIKSANSGVSFHSKYQCP 225 V+ Y E+P + IKS G + CP Sbjct: 831 VMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCP 864 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 122,880 Number of Sequences: 438 Number of extensions: 2453 Number of successful extensions: 9 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10873896 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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