Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0564
(424 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56750.1 68418.m07083 Ndr family protein similar to SP|O23969... 31 0.24
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 30 0.56
At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 / ... 30 0.74
At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 / ... 30 0.74
At5g42620.1 68418.m05188 expressed protein 29 1.3
At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 / ... 29 1.3
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 1.7
At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969... 28 3.0
At2g24170.1 68415.m02888 endomembrane protein 70, putative simil... 27 4.0
At5g19600.1 68418.m02333 sulfate transporter, putative similar t... 27 6.9
At3g01345.1 68416.m00053 Expressed protein 27 6.9
At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase, put... 27 6.9
At1g71120.1 68414.m08207 GDSL-motif lipase/hydrolase family prot... 27 6.9
>At5g56750.1 68418.m07083 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 346
Score = 31.5 bits (68), Expect = 0.24
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = -3
Query: 365 RIDSAISTMVSMLVLWYTEQPPLRTHRRMAIKSANSGVSFHSKYQCPT*SSRPYCNFEIY 186
R+ +A S +VS++V E+P L T+ +A+ N F + CP +S NF IY
Sbjct: 23 RVKTA-SGVVSVIVYGDREKPALITYPDLAL---NHMSCFQGLFFCPEAASLLLHNFCIY 78
Query: 185 SINPP 171
I+PP
Sbjct: 79 HISPP 83
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 30.3 bits (65), Expect = 0.56
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 70 YLTA*TFNCLLNKLFSTFTNIIIKKPSGYSWLQVGGFIE*ISKLQYG---RELYVGHW 234
++ A T + L S F I++KPS SWL+ G ++ +S + G E + W
Sbjct: 631 FVVATTVGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIGLTANEFFAPRW 688
>At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 403
Score = 29.9 bits (64), Expect = 0.74
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 238 FEWKLTPELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFN 417
F P LA IA + + G ++ + E V++ ES+RG ++Y++Q N
Sbjct: 96 FSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPTNEN 155
Query: 418 IM 423
+M
Sbjct: 156 LM 157
>At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 352
Score = 29.9 bits (64), Expect = 0.74
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 238 FEWKLTPELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFN 417
F P LA IA + + G ++ + E V++ ES+RG ++Y++Q N
Sbjct: 45 FSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPTNEN 104
Query: 418 IM 423
+M
Sbjct: 105 LM 106
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -3
Query: 401 LVPVCMI*IFLPRIDSAISTMVSMLVLWYTEQPPLRTH----RRMAIKSANSGVSFHSKY 234
LVP C + F+ + IS + +L+L R H +R+A++ SGV+ HS
Sbjct: 4 LVPCCRL--FVSNLRFVISWVSLILLLLGASDAKARHHHHHHQRIAVEGVESGVASHSCI 61
Query: 233 QCPT*SSRPYCNFEIYSINP 174
R ++YS+ P
Sbjct: 62 HDQIIEQRKRPGRKVYSVTP 81
>At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 /
phosphoribosyl diphosphate synthetase 2 (PRS2) identical
to SP:Q42583 from [Arabidopsis thaliana]; strong
similarity to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 400
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 238 FEWKLTPELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQTGTNDVFFN 417
F P L+ IA + + G S+ + E V++ ES+RG +++++Q N
Sbjct: 93 FSGTANPALSQEIAWYMGLELGKVSIKRFADGEIYVQLKESVRGCDVFLVQPTCTPTNEN 152
Query: 418 IM 423
+M
Sbjct: 153 LM 154
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 109 LFSTFTNIIIKKPSGYSWLQVGGFIE*ISKLQYG 210
L S F I++KPS SWL+ G ++ +S + G
Sbjct: 660 LLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIG 693
>At2g19620.1 68415.m02292 Ndr family protein similar to SP|O23969
Pollen specific protein SF21 {Helianthus annuus};
contains Pfam profile PF03096: Ndr family
Length = 347
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -3
Query: 338 VSMLVLWYTEQPPLRTHRRMAIKSANSGVSFHSKYQCPT*SSRPYCNFEIYSINPP 171
VS++V E+P L T+ +A+ N F + CP S NF IY I+PP
Sbjct: 31 VSVVVYGDQEKPALITYPDVAL---NYMSCFQGLFLCPEAVSLLLHNFCIYHISPP 83
>At2g24170.1 68415.m02888 endomembrane protein 70, putative similar
to MURA transposase of maize Mutator transposon
Length = 637
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 59 KNQRKYFIHIKLTYFTEYH 3
K + KYFIH LT+ YH
Sbjct: 165 KKEEKYFIHNHLTFTVRYH 183
>At5g19600.1 68418.m02333 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain; supporting cDNA
gi|14141683|dbj|AB061739.1|
Length = 634
Score = 26.6 bits (56), Expect = 6.9
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 151 GYSWLQVGGFIE*ISKLQYGRELYVGHWYFEW-KLTPELADLIAIRLCVRKGGCSVYHKT 327
GY LQ+G S + + YV W + PE + + + L G S T
Sbjct: 517 GYIILQLG------SPVFFANSTYVRERILRWIRDEPEAIEFLLLDL----SGVSTIDMT 566
Query: 328 NIETIVEIAESIRGKNIYII 387
+ET++EI + KNI ++
Sbjct: 567 GMETLLEIQRILGSKNIKMV 586
>At3g01345.1 68416.m00053 Expressed protein
Length = 466
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 323 LWYTEQPPLRTHRRMAIKSANSGV 252
LW + PL THR+MA + G+
Sbjct: 301 LWTLSETPLPTHRQMAFRVKRIGI 324
>At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase,
putative / phosphoribosyl diphosphate synthetase,
putative very strong similarity to phosphoribosyl
pyrophosphate synthase [Spinacia oleracea] GI:4902849;
contains Pfam profile PF00156: Phosphoribosyl
transferase domain
Length = 394
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 238 FEWKLTPELADLIAIRLCVRKGGCSVYHKTNIETIVEIAESIRGKNIYIIQ 390
F P LA I+ L + G + + E V++ ES+RG +++++Q
Sbjct: 81 FSGTANPILAQEISCYLGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQ 131
>At1g71120.1 68414.m08207 GDSL-motif lipase/hydrolase family protein
similar to family II lipases EXL3 GI:15054386 from
[Arabidopsis thaliana]; contains Pfam profile PF00657:
GDSL-like Lipase/Acylhydrolase
Length = 362
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/29 (37%), Positives = 23/29 (79%), Gaps = 3/29 (10%)
Frame = +1
Query: 334 ETIVE---IAESIRGKNIYIIQTGTNDVF 411
+T+VE I +SI +++++++TG+ND+F
Sbjct: 142 QTLVEQNLIEKSIIQESLFLLETGSNDIF 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,243,019
Number of Sequences: 28952
Number of extensions: 182788
Number of successful extensions: 417
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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