Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0562
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   124   7e-29
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    32   0.48 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    29   3.4  
AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  124 bits (299), Expect = 7e-29
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = +3

Query: 510 VIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPV 689
           VI+S ILERDE+  D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME   GHPV
Sbjct: 163 VIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPV 222

Query: 690 FATRYGKIAVNIC 728
           F T+YG+I +NIC
Sbjct: 223 FETKYGRIGINIC 235



 Score = 94.3 bits (224), Expect = 8e-20
 Identities = 43/82 (52%), Positives = 54/82 (65%)
 Frame = +1

Query: 259 VQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWC 438
           +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPFAFCTRE+ PW 
Sbjct: 79  IQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERLPWT 138

Query: 439 EFAESAEDGPTTTFLRELAIKY 504
           EFAES   GPTT FL +LA+K+
Sbjct: 139 EFAESVYTGPTTQFLSKLAVKH 160


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 474 DLPSGTRHQVRKVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 614
           DLP+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 474 DLPSGTRHQVRKVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 614
           DLP+G   +   +++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 613 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITLRT*WRVPEGRSWSARLQLIR 446
           +C P+TF ++   T +       F+++  IE+T I + T  +  EG    A+  +IR
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -3

Query: 488 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 342
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +3

Query: 450 IS*RRADHDLPSGTRHQVRKVIVSSILERDEK--HSDILWNTA 572
           IS    D+D  + T  + +K++VS + E DE+   SD+LW  A
Sbjct: 37  ISSEAMDYDTNTITVREGKKLMVSCVFESDEQIHKSDLLWKQA 79


>AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical
           protein F13B6.1 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 662 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 570
           V+ GFV + DS+++V     D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 310 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 444
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 310 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 444
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 561 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 665
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 337 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 492
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 337 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 492
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,333,619
Number of Sequences: 27780
Number of extensions: 376213
Number of successful extensions: 1140
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)