Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0561
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N5Q1 Cluster: Putative uncharacterized protein; n=2; ...    36   1.3  
UniRef50_Q54LW8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_UPI00006CC357 Cluster: hypothetical protein TTHERM_0058...    33   5.2  
UniRef50_Q2JHT2 Cluster: Putative uncharacterized protein; n=2; ...    33   5.2  
UniRef50_Q9SQW9 Cluster: Putative retroelement pol polyprotein; ...    33   6.8  
UniRef50_A7PA70 Cluster: Chromosome chr14 scaffold_9, whole geno...    33   6.8  
UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP)...    33   6.8  
UniRef50_Q21LW9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q4N5Q1 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 978

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
 Frame = +2

Query: 146 EIIISQNGNQSG-KRNISKIKKRNSETCFSYK--DIREQIYLV--EYQHLLERQDIKVRH 310
           +++   N ++SG K+NI  + K ++  C S K  +IR   YL   + Q   E  ++KV  
Sbjct: 281 DVVEDSNESESGSKQNIQYVYKNHNSLCISVKSEEIRGDKYLTIFDLQKNSEMYNVKVLK 340

Query: 311 VLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSE 436
                  ++E    +  NV  LT+ +P+E+H  +  +E   E
Sbjct: 341 KTENGYVNHE-KKLIDLNVTNLTDPKPVEEHSYKHLLEKQGE 381


>UniRef50_Q54LW8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1649

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 23/103 (22%), Positives = 43/103 (41%)
 Frame = +2

Query: 158 SQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVLALYLRSY 337
           + N N + K NI+       ETC SY D   ++ ++   +L  +++I V  + +  +   
Sbjct: 374 NNNNNNNNKCNINNSNNSIEETCPSYTDCMYELEIIGLSNLPNQKNIFVDKIKSFLINLS 433

Query: 338 ELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAE 466
           E  +  PF+ +   N      +    +  G SE      +E E
Sbjct: 434 ERLS--PFSNNNNNNNNNNNNNNNNNNNNGNSERQFVDQNEEE 474


>UniRef50_UPI00006CC357 Cluster: hypothetical protein
           TTHERM_00586540; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00586540 - Tetrahymena
           thermophila SB210
          Length = 309

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
 Frame = +2

Query: 149 IIISQNG----NQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVL 316
           II S NG    N   +  I K +K   +  +SY++ +    +     LL++Q+IK+   L
Sbjct: 193 IIFSHNGKIWLNNISREGIIKEQKEVEKKQYSYEERQALSIISNLLKLLDQQNIKISTDL 252

Query: 317 ALYLRSYELTNTV-PFNVDALTNGQPIEQHPTEK-DVEGPSENN 442
              L +Y +T  + P N+      + ++Q+  +K + + P E N
Sbjct: 253 LDELYNYVITKKIEPSNILTQAGSKELKQYLQQKLETQIPKEIN 296


>UniRef50_Q2JHT2 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain JA-2-3B'a(2-13))
           (Cyanobacteria bacteriumYellowstone B-Prime)
          Length = 561

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 22/75 (29%), Positives = 38/75 (50%)
 Frame = +2

Query: 173 QSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVLALYLRSYELTNT 352
           +S + ++ ++  +  + C S  +I  Q+ L  Y   LE  ++K RH+LAL L  Y  T  
Sbjct: 146 RSFRPHLQRVYTQIMKVCRSLPNIAFQLCLRAY---LEYNEVKNRHLLALLLSKYFYTLY 202

Query: 353 VPFNVDALTNGQPIE 397
               +D   +G P+E
Sbjct: 203 RIGGLDGWESGDPVE 217


>UniRef50_Q9SQW9 Cluster: Putative retroelement pol polyprotein;
           n=1; Arabidopsis thaliana|Rep: Putative retroelement pol
           polyprotein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1661

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = +2

Query: 260 LVEYQHLLERQDIKVRHVLALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSEN 439
           +VE   L+E Q+   R+ ++  +R+   TNT PFN    T  + +++ PT +    PS +
Sbjct: 371 IVEIAKLIESQE---RNAVSYQVRNQARTNTAPFNNQVSTGSRVVDRAPTRQPFI-PSRD 426

Query: 440 NSTSDSEAE 466
            + +    E
Sbjct: 427 TTRASGSGE 435


>UniRef50_A7PA70 Cluster: Chromosome chr14 scaffold_9, whole genome
            shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
            chr14 scaffold_9, whole genome shotgun sequence - Vitis
            vinifera (Grape)
          Length = 1166

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
 Frame = +2

Query: 146  EIIISQNGNQSGKRNISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVR-HVLAL 322
            EI +   GN +      K+ +  S  C S + + E I         +R  + +R  VLA 
Sbjct: 694  EIALDAAGNINLPNCYEKLVEAYSSLCSSLEAL-ESIVKPGQAFCFQRWFLALRVKVLAA 752

Query: 323  YLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAEMQYLFNRSKITA 502
             +   +L  TVPFN D +TN    EQ      VE P  +   S    +++ L     + A
Sbjct: 753  VVDIVKLLGTVPFNQDKITN----EQVKRSILVEYPQLSQQISQVSFQLKRLAQEFDLMA 808

Query: 503  SGIRG*N--TFRILAELKLANDLVAII 577
            +   G +  + +I++ L L+  ++A I
Sbjct: 809  TSFIGMDSKSSKIISALALSCSILAFI 835


>UniRef50_Q4D3R0 Cluster: Mucin-associated surface protein (MASP),
           putative; n=16; Trypanosoma cruzi|Rep: Mucin-associated
           surface protein (MASP), putative - Trypanosoma cruzi
          Length = 367

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 350 TVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEA 463
           TV    DA T G P   HP +   EG ++  + SD EA
Sbjct: 267 TVALRSDAGTEGTPPTNHPNQPSTEGATQPETNSDGEA 304


>UniRef50_Q21LW9 Cluster: Putative uncharacterized protein; n=1;
           Saccharophagus degradans 2-40|Rep: Putative
           uncharacterized protein - Saccharophagus degradans
           (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 512

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/46 (36%), Positives = 29/46 (63%)
 Frame = +2

Query: 314 LALYLRSYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTS 451
           LALYL+ Y +T ++P++VD+L++     +H  ++  E P  NN  S
Sbjct: 137 LALYLQHYLVTGSLPWHVDSLSS----VEHQWQQLFESPEYNNLAS 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,603,820
Number of Sequences: 1657284
Number of extensions: 13204421
Number of successful extensions: 39468
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39437
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)