BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0561 (706 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0124 - 31830797-31831371,31831510-31831532,31832143-318322... 29 2.7 03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 29 2.7 12_01_0984 - 9985300-9985804,9985894-9986933 29 4.8 01_05_0797 + 25313226-25313330,25313464-25313545,25317573-253176... 28 8.3 >03_06_0124 - 31830797-31831371,31831510-31831532,31832143-31832271, 31833287-31834842 Length = 760 Score = 29.5 bits (63), Expect = 2.7 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +1 Query: 514 RVKYLSNTCRTETSKRSSGHNPFHERRRALTASTPLRGRS-HEAPKKTYGTKSTQTE 681 R + SN+ T TS RSS H FH R + P G+S + K+ G+ + E Sbjct: 677 REELQSNSSLTSTSSRSSWHFAFHGDSRRSSELRPTLGQSARKQSVKSQGSDEDEDE 733 >03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068, 27159169-27159397,27159506-27159634,27159725-27159838, 27160059-27160258,27160301-27160599,27160713-27160923, 27161017-27161172,27161290-27161447,27161532-27161724, 27162015-27162406,27162537-27162717,27162802-27163031, 27163108-27163753,27163833-27163902,27163994-27164244 Length = 1860 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +1 Query: 493 DHSIWHPRVKYLSNTCRTETSKRSSGHNPFHERRRALTASTPLRGR 630 +H ++H LS+ CRT ++ + + H R T LR R Sbjct: 219 EHDLYHDGESVLSHDCRTAVKEKDTNSDREHPHERRSTRLERLRSR 264 >12_01_0984 - 9985300-9985804,9985894-9986933 Length = 514 Score = 28.7 bits (61), Expect = 4.8 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = -2 Query: 363 LKGTVFVSSYERKYNAKTCLTFISCLSRRCWYS 265 +K + +S Y+ Y+ KTCL ++S W S Sbjct: 1 MKDILLLSYYDLPYHLKTCLLYLSIFPEDYWIS 33 >01_05_0797 + 25313226-25313330,25313464-25313545,25317573-25317660, 25318298-25318331,25318399-25319243,25319278-25319371, 25319432-25319611 Length = 475 Score = 27.9 bits (59), Expect = 8.3 Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Frame = +2 Query: 155 ISQNGNQSGKR--NISKIKKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVLALYL 328 + GN +R + ++++ +SET FS+KD + LV Q L ++ K +++ Y+ Sbjct: 43 VKPRGNDIHRRWLRVRRVEE-DSETDFSFKDANKLCSLVRKQKALAKK--KRKYLAESYV 99 Query: 329 RSYELT 346 RS E++ Sbjct: 100 RSDEVS 105 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,379,552 Number of Sequences: 37544 Number of extensions: 354130 Number of successful extensions: 1000 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 974 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1000 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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