Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0561
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical ... 30 1.4
AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical ... 30 1.4
Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical pr... 28 7.5
L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical
protein C08E3.5 protein.
Length = 248
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 KRLWILLEWITENYAYPAYCVVNVEKLSYH-RTEISPGKEILVRLKNGTARRALVIRISG 248
+ + +L+ W+T NY+ +CV V + YH R E G ++V R+ + ++G
Sbjct: 47 RNMKVLINWLTLNYSEKLHCVSIVYNMRYHIRYEQKDGGCVVVYYFGSPKRKEIQKFVAG 106
>AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3c protein.
Length = 726
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 278 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448
+++R +R V+A +Y + E + VP ++ N QP Q+P + D+ PSE S
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419
Query: 449 SDSEAE 466
S E
Sbjct: 420 GPSAEE 425
>AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3a protein.
Length = 743
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 278 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448
+++R +R V+A +Y + E + VP ++ N QP Q+P + D+ PSE S
Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419
Query: 449 SDSEAE 466
S E
Sbjct: 420 GPSAEE 425
>Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical
protein M153.3 protein.
Length = 176
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 247 GANLFSGIPTSSGEAGYKSKTCFGVVFAFI*ADEHCAFQCGRIDK 381
G T SG G KS TC VFAF + C F C ++K
Sbjct: 112 GTQFCEAFVTRSGMWGRKSLTCQHSVFAFRVCRKTCGF-CASVNK 155
>Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 27.9 bits (59), Expect = 7.5
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 KSSPKITLRFYKL-KICTMSKRLWILLEWITENYAYPAYCVVNVEKLSYHR-TEISPGKE 188
K S K L F L ++C + R ILL T+N +P +C N + +Y R S G
Sbjct: 379 KESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTN-KMSNYERAAPSSHGSS 437
Query: 189 ILVRLKNGTARRALVIRIS 245
++ N A LVIR S
Sbjct: 438 TTKKIANAIA--DLVIRRS 454
>L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical
protein K06H7.2 protein.
Length = 406
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 293 DIKVRHVLALYLR-SYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAEM 469
D K R LA+ + Y+L N+VP N+ + + E HP+ K V E NS E
Sbjct: 64 DYKSRCQLAICSKIDYDLVNSVPMNIHGIGFSEEYE-HPSVK-VCVEFEKNSNKKFELIF 121
Query: 470 QYLFNRSKI 496
+ N ++I
Sbjct: 122 EQSLNDTEI 130
>AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 27.9 bits (59), Expect = 7.5
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 KSSPKITLRFYKL-KICTMSKRLWILLEWITENYAYPAYCVVNVEKLSYHR-TEISPGKE 188
K S K L F L ++C + R ILL T+N +P +C N + +Y R S G
Sbjct: 379 KESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTN-KMSNYERAAPSSHGSS 437
Query: 189 ILVRLKNGTARRALVIRIS 245
++ N A LVIR S
Sbjct: 438 TTKKIANAIA--DLVIRRS 454
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 404 PTEKDVEGPSENNSTSDSEAEMQYLFNRSKITASGIRG*NTFRILAEL-KLANDLVAIIR 580
P D G D +++ + NRS +T G+ F+I++E+ KL +D+ + R
Sbjct: 848 PVAADSVGALLQTHGYDRMDQLKGIINRSILTEIGVDDVTKFKIMSEIEKLKDDVASAGR 907
Query: 581 F 583
F
Sbjct: 908 F 908
>Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical
protein F02D10.6 protein.
Length = 199
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 149 FLNIDHAIRWISVVFRNPLEQY 84
FL ++ I WIS +F NP+E +
Sbjct: 24 FLTVEMVIVWISYLFINPVENF 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,045
Number of Sequences: 27780
Number of extensions: 326918
Number of successful extensions: 1064
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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