BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0561 (706 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical ... 31 1.1 AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical ... 30 1.4 AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical ... 30 1.4 Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical pr... 28 5.7 Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical pr... 28 7.5 L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical pr... 28 7.5 AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical ... 28 7.5 Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 27 9.9 Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical pr... 27 9.9 >AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical protein C08E3.5 protein. Length = 248 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = +3 Query: 72 KRLWILLEWITENYAYPAYCVVNVEKLSYH-RTEISPGKEILVRLKNGTARRALVIRISG 248 + + +L+ W+T NY+ +CV V + YH R E G ++V R+ + ++G Sbjct: 47 RNMKVLINWLTLNYSEKLHCVSIVYNMRYHIRYEQKDGGCVVVYYFGSPKRKEIQKFVAG 106 >AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical protein Y61A9LA.3c protein. Length = 726 Score = 30.3 bits (65), Expect = 1.4 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +2 Query: 278 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448 +++R +R V+A +Y + E + VP ++ N QP Q+P + D+ PSE S Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419 Query: 449 SDSEAE 466 S E Sbjct: 420 GPSAEE 425 >AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical protein Y61A9LA.3a protein. Length = 743 Score = 30.3 bits (65), Expect = 1.4 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +2 Query: 278 LLERQDIKVRHVLA-LYLRSYELTNTVPFNVDALTNGQPI--EQHPTEKDVEGPSENNST 448 +++R +R V+A +Y + E + VP ++ N QP Q+P + D+ PSE S Sbjct: 360 IIDRFKFLLRMVVADVYYQGTESSMAVPKALETGYNTQPYPPNQYPLDTDIRRPSERPSN 419 Query: 449 SDSEAE 466 S E Sbjct: 420 GPSAEE 425 >Z67995-5|CAA91945.2| 176|Caenorhabditis elegans Hypothetical protein M153.3 protein. Length = 176 Score = 28.3 bits (60), Expect = 5.7 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +1 Query: 247 GANLFSGIPTSSGEAGYKSKTCFGVVFAFI*ADEHCAFQCGRIDK 381 G T SG G KS TC VFAF + C F C ++K Sbjct: 112 GTQFCEAFVTRSGMWGRKSLTCQHSVFAFRVCRKTCGF-CASVNK 155 >Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical protein K11E8.1c protein. Length = 720 Score = 27.9 bits (59), Expect = 7.5 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +3 Query: 15 KSSPKITLRFYKL-KICTMSKRLWILLEWITENYAYPAYCVVNVEKLSYHR-TEISPGKE 188 K S K L F L ++C + R ILL T+N +P +C N + +Y R S G Sbjct: 379 KESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTN-KMSNYERAAPSSHGSS 437 Query: 189 ILVRLKNGTARRALVIRIS 245 ++ N A LVIR S Sbjct: 438 TTKKIANAIA--DLVIRRS 454 >L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical protein K06H7.2 protein. Length = 406 Score = 27.9 bits (59), Expect = 7.5 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 293 DIKVRHVLALYLR-SYELTNTVPFNVDALTNGQPIEQHPTEKDVEGPSENNSTSDSEAEM 469 D K R LA+ + Y+L N+VP N+ + + E HP+ K V E NS E Sbjct: 64 DYKSRCQLAICSKIDYDLVNSVPMNIHGIGFSEEYE-HPSVK-VCVEFEKNSNKKFELIF 121 Query: 470 QYLFNRSKI 496 + N ++I Sbjct: 122 EQSLNDTEI 130 >AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical protein K11E8.1c protein. Length = 720 Score = 27.9 bits (59), Expect = 7.5 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%) Frame = +3 Query: 15 KSSPKITLRFYKL-KICTMSKRLWILLEWITENYAYPAYCVVNVEKLSYHR-TEISPGKE 188 K S K L F L ++C + R ILL T+N +P +C N + +Y R S G Sbjct: 379 KESSKKKLFFTLLFEVCPHTSRSHILLRDNTKNIYHPYHCFTN-KMSNYERAAPSSHGSS 437 Query: 189 ILVRLKNGTARRALVIRIS 245 ++ N A LVIR S Sbjct: 438 TTKKIANAIA--DLVIRRS 454 >Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein C11E4.6 protein. Length = 1170 Score = 27.5 bits (58), Expect = 9.9 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = +2 Query: 404 PTEKDVEGPSENNSTSDSEAEMQYLFNRSKITASGIRG*NTFRILAEL-KLANDLVAIIR 580 P D G D +++ + NRS +T G+ F+I++E+ KL +D+ + R Sbjct: 848 PVAADSVGALLQTHGYDRMDQLKGIINRSILTEIGVDDVTKFKIMSEIEKLKDDVASAGR 907 Query: 581 F 583 F Sbjct: 908 F 908 >Z67990-6|CAA91937.1| 199|Caenorhabditis elegans Hypothetical protein F02D10.6 protein. Length = 199 Score = 27.5 bits (58), Expect = 9.9 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -3 Query: 149 FLNIDHAIRWISVVFRNPLEQY 84 FL ++ I WIS +F NP+E + Sbjct: 24 FLTVEMVIVWISYLFINPVENF 45 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,125,045 Number of Sequences: 27780 Number of extensions: 326918 Number of successful extensions: 1064 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1063 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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