BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0561 (706 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 2.8 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.7 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 3.7 M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 22 6.5 AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.5 L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 8.6 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.6 AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.6 AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.6 AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.6 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 23.0 bits (47), Expect = 2.8 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = +1 Query: 577 PFHERRRALTASTPLRGRSHEAPKKTYGTKSTQTEY 684 P H RR+ L +G E T GTK E+ Sbjct: 271 PQHARRKVLAGIVQTKGSDAELICVTTGTKCVSGEH 306 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 22.6 bits (46), Expect = 3.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 Query: 529 SNTCRTETSKRSSG 570 SNTC S+RSSG Sbjct: 18 SNTCSNSQSQRSSG 31 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 22.6 bits (46), Expect = 3.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 Query: 529 SNTCRTETSKRSSG 570 SNTC S+RSSG Sbjct: 18 SNTCSNSQSQRSSG 31 >M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H90. ). Length = 74 Score = 21.8 bits (44), Expect = 6.5 Identities = 11/47 (23%), Positives = 23/47 (48%) Frame = +2 Query: 203 KKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVLALYLRSYEL 343 +KR +T Y+ + + ++L R+ I++ H L L R ++ Sbjct: 8 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKI 54 >AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein protein. Length = 352 Score = 21.8 bits (44), Expect = 6.5 Identities = 11/47 (23%), Positives = 23/47 (48%) Frame = +2 Query: 203 KKRNSETCFSYKDIREQIYLVEYQHLLERQDIKVRHVLALYLRSYEL 343 +KR +T Y+ + + ++L R+ I++ H L L R ++ Sbjct: 270 RKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKI 316 >L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. Length = 150 Score = 21.4 bits (43), Expect = 8.6 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +2 Query: 227 FSYKDIREQIYLVEYQHLLE 286 F + D R YLV Q LLE Sbjct: 121 FHHDDARPHTYLVTRQKLLE 140 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 21.4 bits (43), Expect = 8.6 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +2 Query: 476 LFNRSKITASGIRG*NTFR 532 +FN +KIT +G+ T+R Sbjct: 371 VFNDTKITITGLNAVTTYR 389 >AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 8.6 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 265 H*IDLLPDILITKARLAVPFFNLTNISFPGLIS 167 H D+ IL TK F +TN S PG++S Sbjct: 158 HGTDIEMRILKTKNECDHVQFLITNTSGPGVVS 190 >AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase protein. Length = 588 Score = 21.4 bits (43), Expect = 8.6 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +2 Query: 326 LRSYELTNTVPFNVDALTN 382 L+ YE+ + VPFN +T+ Sbjct: 308 LKYYEVGSNVPFNFKFITD 326 >AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 8.6 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 265 H*IDLLPDILITKARLAVPFFNLTNISFPGLIS 167 H D+ IL TK F +TN S PG++S Sbjct: 158 HGTDIEMRILKTKNECDHVQFLITNTSGPGVVS 190 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 198,090 Number of Sequences: 438 Number of extensions: 3894 Number of successful extensions: 10 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21683070 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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