Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0559
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 616 LSCIYMSYKYYIYMFFFASCIFY 548
           L CIY    Y++   FF  CI+Y
Sbjct: 130 LLCIY----YFVVPLFFLLCIYY 148



 Score = 23.0 bits (47), Expect = 2.3
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -3

Query: 147 HIIRILCTFFTYYFRFIF 94
           H++ ++C ++ YY   +F
Sbjct: 251 HLLLLVCIYYFYYMHLLF 268


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/55 (27%), Positives = 21/55 (38%)
 Frame = +1

Query: 91  WENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQN 255
           WE   E   E+G K   D  +   T N  A    P     S       +P+SP++
Sbjct: 14  WEGGEEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRS 68


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/69 (20%), Positives = 32/69 (46%)
 Frame = +1

Query: 472 NRKKKNWIHKRMGINKKDSKEKTTTSRRYTKQKRTCKCSIYRTCRCRKVDYWWSNNVTHW 651
           ++  ++ + +  G +  D++E    S R  K     K    +T +C++ D+     +  W
Sbjct: 162 SKTSEHSVDELSGKSDNDAEEYDEQSLRVPKVNSHGKI---KTFKCKQCDFVAITKLEQW 218

Query: 652 NGRQKNIRK 678
           N  + +IR+
Sbjct: 219 NHSKVHIRE 227


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 369 PPPTTASVPPDVSPTADS 422
           P PT   +PP   PT  S
Sbjct: 207 PKPTVPKIPPAEFPTTSS 224


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 369 PPPTTASVPPDVSPTADS 422
           P PT   +PP   PT  S
Sbjct: 207 PKPTVPKIPPAEFPTTSS 224


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 517 KKDSKEKTTTSRRYTKQKRTCK 582
           K+D K+K T   +YT+ +   K
Sbjct: 260 KEDKKKKKTIKEKYTEDEELNK 281


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 531 FGIFFVNSHPLVYPILLLPVH 469
           FGIF   + PLV P L    H
Sbjct: 193 FGIFPGGAPPLVSPFLAAMAH 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,472
Number of Sequences: 336
Number of extensions: 2462
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)