Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0559
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 49 3e-06
03_01_0547 + 4093196-4093657,4094267-4095148 49 3e-06
03_01_0544 + 4082528-4082989,4083585-4084466 49 3e-06
03_01_0543 + 4076981-4077442,4078145-4079026 49 3e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 43 3e-04
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 41 8e-04
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 41 8e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 36 0.030
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 36 0.040
02_04_0462 + 23131433-23132836 33 0.28
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.37
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 32 0.49
01_06_0209 - 27549615-27550246,27550358-27550452,27553290-275535... 32 0.49
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 31 0.64
08_02_0321 - 15761468-15761512,15761573-15761673,15761854-157619... 30 1.5
03_04_0127 - 17508808-17509029,17509195-17509938,17510004-175102... 30 1.5
02_05_0959 + 33086498-33086544,33087295-33087967,33088665-330890... 30 2.0
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 29 2.6
06_01_0692 - 5047162-5047441,5047602-5047726,5048257-5048327,504... 29 2.6
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 2.6
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 2.6
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 29 2.6
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 29 3.4
10_07_0138 + 13325418-13325954 29 4.5
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 4.5
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 29 4.5
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 28 6.0
08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575 28 7.9
04_01_0103 + 1082077-1082167,1083037-1085477 28 7.9
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 7.9
02_04_0017 + 18937774-18937864,18938505-18940945 28 7.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682
+K H+N+V IGHVD+GKST G ++ G +DKR +E++
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERF 42
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682
+K H+N+V IGHVD+GKST G ++ G +DKR +E++
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERF 42
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682
+K H+N+V IGHVD+GKST G ++ G +DKR +E++
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERF 42
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682
+K H+N+V IGHVD+GKST G ++ G +DKR +E++
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERF 42
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 605 DAGKSTIGGQIMSLTGMVDKRTLEKY 682
DAGKST GGQI+ L+G VD RT++KY
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKY 29
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 578 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 679
+N+ +GHVD+GKST+ G+++ L G + K+ + K
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHK 281
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 578 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 679
+N+ +GHVD+GKST+ G+++ L G + K+ + K
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHK 281
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 581 NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 679
N I H+D GKST+ +++ LTG V KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 548 VEDTRSKKEHVNVVFIGHVDAG 613
VE+ + K H+NVVFIGHVD G
Sbjct: 97 VEEEKETKRHLNVVFIGHVDPG 118
>02_04_0462 + 23131433-23132836
Length = 467
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 569 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682
K HVN+ IGHVD GK+T+ + + V +KY
Sbjct: 68 KPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKY 105
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 581 NVVFIGHVDAGKSTIGGQIMSLTGMVDK 664
N I HVD GKST+ +++ LTG + K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 354 PRVEEPPPTTASVPPDVSPTADSWEVE 434
PRVE PPP+ A+ PP + P D + E
Sbjct: 62 PRVEGPPPSPATAPPMLHPREDDEDEE 88
>01_06_0209 -
27549615-27550246,27550358-27550452,27553290-27553507,
27553590-27553757
Length = 370
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +1
Query: 403 SRPLQTAGKLR----LMMHYSHLKKTMNRKKKNWI-HK-RMGINKKDSKEKTTTSR-RYT 561
+RP+ T GKL+ +++ Y++ K +K NW+ H+ +G ++++ + S+ Y
Sbjct: 206 TRPVFTGGKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKDGELVVSKVFYQ 265
Query: 562 KQKRTCKCSIYRTCRCRKVDYWWSNNV 642
Q R C T + VD NN+
Sbjct: 266 TQPRQCGGGSAATAKDLSVDLVAGNNI 292
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 569 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDK 664
K HVNV IGHVD GK+T+ I + K
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAITKVLAEAGK 96
>08_02_0321 -
15761468-15761512,15761573-15761673,15761854-15761950,
15762671-15762742,15762838-15762960,15763047-15763129,
15763269-15763410,15763496-15763654
Length = 273
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 600 CPINTTFTCSFLLRVSSTRGGFFFGIFFVNSHPLVYPILLL 478
C T+ TC+F L TR G FF ++F L + LLL
Sbjct: 27 CASATSNTCAFSLAEHLTREGMFFDLYFRTQSYLRFVSLLL 67
>03_04_0127 -
17508808-17509029,17509195-17509938,17510004-17510242,
17510334-17510436,17510666-17510770,17510838-17510906,
17510998-17511402,17512048-17512156,17512240-17512295
Length = 683
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 46 LRSATIMSNNGAPDSWENEAEIIGE 120
L I +NN AP SW N +IIGE
Sbjct: 397 LEDRIICTNNSAPLSWYNRTQIIGE 421
>02_05_0959 +
33086498-33086544,33087295-33087967,33088665-33089058,
33089140-33089210,33089373-33089497,33089705-33089821,
33094128-33094238,33094321-33094413,33094726-33094984,
33095067-33095189
Length = 670
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 KGAKDSNDVSSKISTLNVNAMEFVPS-FSKP 210
KG + + S ++TLN NA EFVPS F P
Sbjct: 29 KGGDAGSKLPSTVTTLNPNAAEFVPSTFRSP 59
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 509 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 679
+L+K K P + S++ +N+ IGHV GKST+ I + + K LE+
Sbjct: 38 DLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELER 94
>06_01_0692 -
5047162-5047441,5047602-5047726,5048257-5048327,
5048453-5048834,5049389-5050126
Length = 531
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 151 SKISTLNVNAMEFVPSFSKPSQASDS 228
+K++ LN NA EFVPS +PS S +
Sbjct: 19 NKVTALNPNAAEFVPSCIRPSFESSA 44
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 354 PRVEEPPPTTASVPPDVSPTADSWE 428
P +PPP PPD P D+W+
Sbjct: 213 PVTPQPPPPPPPPPPDSKPGVDTWD 237
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 463 KTMNRKKKNWIHKRMGINKKDSKEKTTTSRRYTKQK 570
K +RKKK+ KR ++K+ K+K ++ ++ TK K
Sbjct: 537 KVFSRKKKSVTPKRPSSSEKEIKDKKSSGKKVTKGK 572
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 360 VEEPPPTTASVPPDVSPTADSWEVEAD 440
++EPPP A P S TA W ++AD
Sbjct: 5 IDEPPPAPAPPQPKQSTTARRWWMKAD 31
>08_02_1437 -
27096364-27097252,27098931-27099022,27099382-27099654,
27099872-27100819
Length = 733
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 82 PDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTS 246
P N AEI + K ++ +S + ++ E V S +KP+ A + SPTS
Sbjct: 158 PSVKNNGAEIKKPQLTKSNSSLSKQALNSIIDKKEVVSSKTKPTSARSTPSSPTS 212
>10_07_0138 + 13325418-13325954
Length = 178
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 398 GRDRCSSRWWFFNTWRSRC 342
G RCS RW WRSRC
Sbjct: 83 GARRCSRRWRRSRRWRSRC 101
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 566 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 658
KK+++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKDNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 KGAKDSNDVSSKISTLNVNAMEFV-PSFSKPSQASDSTDSPTSPQNQ 258
K K+ D ++ S L + E PS KPS A+ S+DSP ++
Sbjct: 692 KREKEKVDALTQSSDLTTSGKEAPKPSLGKPSSANTSSDSPVRASSE 738
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 136 SNDVSSKISTLNVNAMEFVPSFS-KPSQASDSTDSPTSPQNQKAVLRIQPGVP 291
S SS++S + +A S S P+ + S+D+ T+P+N+K L P +P
Sbjct: 221 SYSASSRVSLPSTSAPSPSSSTSTSPTYSCSSSDTVTTPRNRKPELSKLPPIP 273
>08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575
Length = 358
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 606 STCPI-NTTFTCSFLLRVSSTRGGFFFGIFFVNSHPLVYPILLLPV 472
S CP+ N TC+ LL V T GF G FV S+P+ L +P+
Sbjct: 159 SPCPLANIVGTCNGLLCVVGTGAGFTTG-GFVLSNPVTGEALHVPL 203
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 566 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 658
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 460 KKTMNRKKKNWIHKRMGINKKDSKEKTTTSRRYTKQKR 573
KK +KKK K+ NKK K+K ++ K+KR
Sbjct: 71 KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 566 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 658
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,693,637
Number of Sequences: 37544
Number of extensions: 255933
Number of successful extensions: 1268
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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