BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0559 (683 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 52 7e-09 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 52 7e-09 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 28 0.095 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 28 0.095 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 27 0.22 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.7 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 3.6 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.3 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 51.6 bits (118), Expect = 7e-09 Identities = 21/39 (53%), Positives = 30/39 (76%) Frame = +2 Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682 +K H+N+V IGHVD+GKST G ++ G +DKRT+EK+ Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKF 42 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 51.6 bits (118), Expect = 7e-09 Identities = 21/39 (53%), Positives = 30/39 (76%) Frame = +2 Query: 566 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKY 682 +K H+N+V IGHVD+GKST G ++ G +DKRT+EK+ Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKF 42 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 27.9 bits (59), Expect = 0.095 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = +2 Query: 509 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 679 +L+K K + S++ +N+ IGHV GKSTI I + + K LE+ Sbjct: 20 DLSKLDVSKLTALSREVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELER 76 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 27.9 bits (59), Expect = 0.095 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 536 KPPRVEDTRSKKEHVNVVFIGHVDAGKSTI 625 K P +++ K H V +GHVD GK+T+ Sbjct: 132 KRPLPNESQLIKRHPIVTIMGHVDHGKTTL 161 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 26.6 bits (56), Expect = 0.22 Identities = 12/46 (26%), Positives = 20/46 (43%) Frame = +1 Query: 445 HYSHLKKTMNRKKKNWIHKRMGINKKDSKEKTTTSRRYTKQKRTCK 582 HY K+ + + NW HK I+ + E+ T + TC+ Sbjct: 175 HYDRYKEEESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQ 220 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 23.0 bits (47), Expect = 2.7 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Frame = +1 Query: 496 HKRMGINKKDSKEKTTTSRRYTKQKRTCKCSIYRTCRCR------KVDYWWSNNVTHWNG 657 HKR +++ ++ R Y K + T K +R R R K+ SN H N Sbjct: 269 HKRYSRSREREQKSYKNEREYRKYRETSK-ERFRDRRERERSKESKIISSLSNKTIHNNN 327 Query: 658 RQKNIRK 678 KN K Sbjct: 328 NYKNYNK 334 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 22.6 bits (46), Expect = 3.6 Identities = 9/31 (29%), Positives = 20/31 (64%) Frame = +1 Query: 478 KKKNWIHKRMGINKKDSKEKTTTSRRYTKQK 570 KKK+ ++++ KK E+ T+ +RY++ + Sbjct: 246 KKKDRRYEKLHNEKKKLLEERTSRKRYSRSR 276 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 21.8 bits (44), Expect = 6.3 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +1 Query: 430 LRLMMHYSHLKKTMNRKKKNWIHKRMGINKKDSK 531 L M +L +TMNRK+ + + M I+ + K Sbjct: 448 LEKFMILCNLMRTMNRKQISELESNMQISPNELK 481 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 154,007 Number of Sequences: 438 Number of extensions: 2990 Number of successful extensions: 11 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20830365 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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