BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0558 (451 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 78 7e-16 SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 54 1e-08 SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 43 2e-05 SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 33 0.027 SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 31 0.082 SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.44 SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 28 0.58 SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 28 0.76 SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 2.3 SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 3.1 SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 25 5.4 SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 25 5.4 SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 7.1 SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 7.1 SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.1 SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 24 9.4 SPAC23G3.04 |||DUF1711 family protein|Schizosaccharomyces pombe|... 24 9.4 >SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 322 Score = 77.8 bits (183), Expect = 7e-16 Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Frame = +3 Query: 255 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 431 AAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN AN Sbjct: 38 AAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTAN 97 Query: 432 VIRYFP 449 V+RYFP Sbjct: 98 VLRYFP 103 >SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 53.6 bits (123), Expect = 1e-08 Identities = 26/65 (40%), Positives = 41/65 (63%) Frame = +3 Query: 255 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 434 A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83 Query: 435 IRYFP 449 +R FP Sbjct: 84 LRAFP 88 Score = 30.7 bits (66), Expect = 0.11 Identities = 16/67 (23%), Positives = 30/67 (44%) Frame = +3 Query: 249 YLAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 428 + + +T P + ++ QV + YK I A I K +G+ F+RG + Sbjct: 235 FTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSS 291 Query: 429 NVIRYFP 449 N+++ P Sbjct: 292 NMLKIIP 298 >SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 326 Score = 43.2 bits (97), Expect = 2e-05 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = +3 Query: 261 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 440 V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL ++G+ A + R Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88 Query: 441 YFP 449 FP Sbjct: 89 VFP 91 >SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamily|Schizosaccharomyces pombe|chr 2|||Manual Length = 426 Score = 32.7 bits (71), Expect = 0.027 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = +3 Query: 270 TAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 449 T V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407 >SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 298 Score = 31.1 bits (67), Expect = 0.082 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = +3 Query: 276 VAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 443 V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+ Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRH 171 >SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 371 Score = 28.7 bits (61), Expect = 0.44 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 336 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 434 A Y DAF +I K +GL +F+RG F ++ Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257 >SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 361 Score = 28.3 bits (60), Expect = 0.58 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +3 Query: 324 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 449 S I +Y G++ F + EQG++ + G A+++R P Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVP 344 >SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 291 Score = 27.9 bits (59), Expect = 0.76 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 282 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419 PI+ VK +Q ++A + YK + +I + GLL FW G Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSG 262 >SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces pombe|chr 1|||Manual Length = 897 Score = 26.2 bits (55), Expect = 2.3 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +3 Query: 72 YEITPNLLFKNQELVFRDPPSACAATPTSTY 164 YE+ N F N PP AC+ TS Y Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392 >SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1072 Score = 25.8 bits (54), Expect = 3.1 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -1 Query: 376 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 269 T+ + + + WSA I +LT C SLT S+ T + Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568 >SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosaccharomyces pombe|chr 1|||Manual Length = 1033 Score = 25.0 bits (52), Expect = 5.4 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +3 Query: 243 WRYLAAVSKTAVAPIE-RVKL-LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 410 +RYL S ++ PI RV L L ++ H SK +D G+V IP+E G + + Sbjct: 350 FRYLILFS--SIIPINLRVNLDLAKIVH-SKNTESDPNLPGVVVRSSNIPEELGRIEY 404 >SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats|Schizosaccharomyces pombe|chr 1|||Manual Length = 302 Score = 25.0 bits (52), Expect = 5.4 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +3 Query: 276 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419 V P+E V++ LQ+Q K + Y G D +I + GL +G Sbjct: 130 VGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172 >SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Schizosaccharomyces pombe|chr 1|||Manual Length = 148 Score = 24.6 bits (51), Expect = 7.1 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 Query: 84 PNLLFKNQELVFRDPPSACAATPT 155 P + K E + RDPP A PT Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27 >SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 155 Score = 24.6 bits (51), Expect = 7.1 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Frame = +2 Query: 272 RRSTHRACQAAAPSTARQQADRR-RPALQGYRRRLRAHPQGAGSP 403 RR RA Q P+T R A+ R RP RR PQ A P Sbjct: 28 RRRQARAGQTK-PATTRPMAEARARPGATAVPRRSPTSPQSAYVP 71 >SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog 3|Schizosaccharomyces pombe|chr 1|||Manual Length = 925 Score = 24.6 bits (51), Expect = 7.1 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +1 Query: 52 TLC--APVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLV 174 T+C AP + L ++C+K+ C + PR PR+ HL+ Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592 >SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 301 Score = 24.2 bits (50), Expect = 9.4 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = +2 Query: 230 RTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQ 388 RTS + R+R D T R +PS + +++ R R R+H + Sbjct: 184 RTSRSTLDRKRFHDASDTERNRYGRSPSPHSRFSEKPRGERYDIRSYSRSHKE 236 >SPAC23G3.04 |||DUF1711 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 194 Score = 24.2 bits (50), Expect = 9.4 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 102 NQELVFRDPPSACAATPTSTYSPSEDHIIEQNVEP-RRSGR 221 N EL PS+ AATPT + S +I + RSG+ Sbjct: 75 NDELAESSKPSSGAATPTRSAPKSSAGLINSGLRALDRSGK 115 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,809,502 Number of Sequences: 5004 Number of extensions: 35115 Number of successful extensions: 104 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 102 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 166231220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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