BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0558 (451 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 119 1e-29 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 119 1e-29 M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 6.2 AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 6.2 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.2 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 119 bits (287), Expect = 1e-29 Identities = 53/65 (81%), Positives = 60/65 (92%) Frame = +3 Query: 255 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 434 AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80 Query: 435 IRYFP 449 IRYFP Sbjct: 81 IRYFP 85 Score = 39.5 bits (88), Expect = 2e-05 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +1 Query: 196 MSNLADPVAFAKDFLAGGI 252 MS LADPVAFAKDFLAGG+ Sbjct: 1 MSGLADPVAFAKDFLAGGV 19 Score = 27.5 bits (58), Expect = 0.071 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +3 Query: 282 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 440 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 119 bits (287), Expect = 1e-29 Identities = 53/65 (81%), Positives = 60/65 (92%) Frame = +3 Query: 255 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 434 AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80 Query: 435 IRYFP 449 IRYFP Sbjct: 81 IRYFP 85 Score = 39.5 bits (88), Expect = 2e-05 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +1 Query: 196 MSNLADPVAFAKDFLAGGI 252 MS LADPVAFAKDFLAGG+ Sbjct: 1 MSGLADPVAFAKDFLAGGV 19 Score = 27.5 bits (58), Expect = 0.071 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +3 Query: 282 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 440 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 >M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-containing gene,partial cds, clone H15. ). Length = 74 Score = 21.0 bits (42), Expect = 6.2 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -2 Query: 396 PAPWGCARRRRR 361 P P GC RRR R Sbjct: 1 PGPNGCPRRRGR 12 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 21.0 bits (42), Expect = 6.2 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +1 Query: 121 VIPHPRVPQLPPRHIHLVKIT 183 +I P +LPP H H +T Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 20.6 bits (41), Expect = 8.2 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +3 Query: 318 HVSKQIAADQRYKGIVDAFVRIPK 389 ++ K IAA +KG+ RIP+ Sbjct: 763 YIQKMIAAAAPFKGMETQDYRIPE 786 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 127,176 Number of Sequences: 438 Number of extensions: 2626 Number of successful extensions: 10 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 11820384 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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