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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0557
         (746 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053...    31   1.3  
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553...    30   1.7  
07_01_0532 - 3935661-3935720,3936314-3936412,3937804-3937908,393...    30   2.2  
01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311     29   3.0  
10_01_0071 - 905696-909028                                             29   3.9  
07_01_0683 - 5145539-5145601,5146113-5146146,5146549-5146650,514...    29   5.2  
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539...    29   5.2  
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257...    29   5.2  
04_04_0055 + 22403608-22403865,22403977-22404075,22404172-224042...    29   5.2  
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612...    28   6.9  
03_02_0830 + 11611588-11611660,11611720-11611952                       28   6.9  
08_02_1019 - 23657175-23658047                                         28   9.1  
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     28   9.1  
07_01_0975 + 8223269-8224354                                           28   9.1  
07_01_0446 - 3371829-3372132,3374691-3375673                           28   9.1  
07_01_0445 - 3365244-3366227                                           28   9.1  
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247...    28   9.1  

>02_05_1074 -
           33904518-33904697,33904886-33904985,33905085-33905311,
           33905511-33908384,33908467-33908643,33908786-33909008,
           33909727-33909806,33910657-33910817,33910892-33910937,
           33911129-33911251,33911730-33911804,33911920-33912120
          Length = 1488

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 259 WKVRE-VRLVTAATGSMGPADGALLLSPSRKHFL 161
           W  R  VR V A + S+GP D  + L P  KHFL
Sbjct: 839 WVKRSAVRFVVACSESIGPVDTFVYLFPHLKHFL 872


>09_02_0569 -
           10752756-10753164,10753229-10753644,10754149-10755349,
           10756770-10756991,10757615-10757767,10757883-10758034,
           10758142-10758222,10758353-10758598,10759394-10759516
          Length = 1000

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 546 TIEQTNCHSISTHTRQSRSFCFERVQLYNGN 454
           T++   CHSI T T  ++  C E V LYN N
Sbjct: 891 TVDIIGCHSIKTLTWINQLPCLEEVYLYNCN 921


>07_01_0532 -
           3935661-3935720,3936314-3936412,3937804-3937908,
           3939474-3939666,3940434-3940513,3940607-3940904,
           3941139-3941431
          Length = 375

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +3

Query: 216 LPVAAVTRRTSRTFH-IPTHHQ 278
           +P+A V R+TSR  H +PT HQ
Sbjct: 277 MPIATVNRKTSRAIHSVPTWHQ 298


>01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311
          Length = 705

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 745 MDTSDGRSVMRKRIPLYSMREGAGLMSFCFMVTAASLLLGEIEAGSGSHFRTR 587
           +DT+DG +  ++++PL   R G G   F     AAS  LG    G+  H R R
Sbjct: 381 LDTNDG-TCTKQQLPLRYGRAGGGYTMFVKTGGAASPALGGGGGGNHHHHRLR 432


>10_01_0071 - 905696-909028
          Length = 1110

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
 Frame = -1

Query: 668 VLLLHGHRCFSSAGRDRSR--LGQSLPHSAGVTSLH-NRLT---VPSQSNRQTVTLFPHT 507
           +LL    R F  +G + S    G SLP +  V  L  NR T    PS S    +T    +
Sbjct: 157 MLLASNIRSFDVSGNNMSGDISGVSLPATLAVLDLSGNRFTGAIPPSLSGCAGLTTLNLS 216

Query: 506 HDSLVAFVLKGSNYIMGTARIDVVFNH 426
           ++ L   + +G   I G   +DV +NH
Sbjct: 217 YNGLAGAIPEGIGAIAGLEVLDVSWNH 243


>07_01_0683 -
           5145539-5145601,5146113-5146146,5146549-5146650,
           5147398-5147658,5148729-5148832,5148999-5149246,
           5149360-5149420,5149507-5149682,5149787-5149844,
           5150804-5150908,5150995-5151228
          Length = 481

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = -1

Query: 698 VLDEGRRRS--NVLLLHGHRCFS--SAGRDRSRLGQSLPHSAGVTSLHNRLTVPS 546
           VL  G RR   N  L+H HR     +AG   S + + +P+  G   +HNRL++PS
Sbjct: 369 VLGVGGRRMMINGGLVHSHRSLEDFNAGDAFSSMKRRVPN--GPDPIHNRLSIPS 421


>06_03_0487 -
           21352955-21353080,21353164-21353357,21353815-21353973,
           21354117-21354242,21354502-21354704,21354892-21355019,
           21355323-21355565,21356734-21356928
          Length = 457

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
 Frame = -2

Query: 271 WVG--MWK--VREVRLVTAATGSMGPADGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPS 107
           W G  +WK    +V +  A+ GS G   G    L         +CVEP  +P    G+P 
Sbjct: 297 WTGPEIWKDTAGKVDVFVASVGSGGTLTGVGRYLKMKNPSINIVCVEPSESPVISGGSPG 356

Query: 106 MSPQKGSPA 80
               +G+ A
Sbjct: 357 PHKIQGTGA 365


>06_01_0358 +
           2573241-2573324,2573509-2573636,2573769-2573971,
           2574129-2574254,2574522-2574680,2574857-2575050,
           2575251-2575376
          Length = 339

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
 Frame = -2

Query: 271 WVG--MWK--VREVRLVTAATGSMGPADGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPS 107
           W G  +WK    +V +  A +G+ G   G    L         ICVEP  +P    G PS
Sbjct: 179 WTGPEIWKDTAGKVDIFVAGSGTGGTISGVGKYLKMKNPAVKVICVEPAESPVISGGKPS 238

Query: 106 MSPQKG-SPASQPYTLN 59
               +G  P   P  L+
Sbjct: 239 RHKIQGMGPGFVPKNLD 255


>04_04_0055 +
           22403608-22403865,22403977-22404075,22404172-22404213,
           22404350-22404479,22405118-22405219,22405960-22406066
          Length = 245

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -1

Query: 722 GDEEAHPLVLDEGRRRSNVLLLHGHR 645
           G+E A P    EG RR   L LHG R
Sbjct: 6   GEEGARPAAAAEGARRPRFLCLHGFR 31


>03_05_0435 -
           24259864-24260206,24260302-24260467,24261175-24261241,
           24261553-24261648,24261718-24261898,24262252-24262323,
           24262393-24262505,24262596-24262817,24263262-24263910,
           24264118-24264206,24265932-24266015,24266219-24266358,
           24266522-24266573
          Length = 757

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 584 GVTSLHNRLTVPSQSNRQTVTLFP-HTHDSLVAFVLKGSNYIMGTARIDVVFN 429
           GV S  N  T PS  +R+   LFP     S +    + S+++    R DV+ +
Sbjct: 627 GVRSTENLFTTPSMDSRRAFALFPSECPKSSLTSSTRTSSHLHSPTRTDVLLS 679


>03_02_0830 + 11611588-11611660,11611720-11611952
          Length = 101

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -1

Query: 278 LMMGRYVESARGASSHR---RYRQHGSSGWRSPALAFTETLPVYLC 150
           L+ GRY+ ++  AS H    R R  G+     PA++    LP++LC
Sbjct: 3   LLWGRYMCTSALASCHTDPMRARSTGALITEQPAVSLISNLPLHLC 48


>08_02_1019 - 23657175-23658047
          Length = 290

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +3

Query: 171 FREGESRRAPSAGPMLPVAAVTRRTSRTFHIPTHHQL-P*IRSPAAVEHSQQ 323
           F   ES      GP  P +AV+      +    HHQ  P  R+PA   H QQ
Sbjct: 108 FHRKESESPTGVGPAEP-SAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQ 158


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 658 FMVTAASLLLGEIEAGSGSHF 596
           F +   S+++G+I AG GSHF
Sbjct: 460 FSIRRRSIIVGQITAGDGSHF 480


>07_01_0975 + 8223269-8224354
          Length = 361

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 232 TAATGSMGPADGALLLSPSRKHFLFICVEPGSTPR-CPSGTPSMSPQKGSPASQP 71
           T   GS G    +   SPS          P  +P   P+G+P+  P  G PAS P
Sbjct: 235 TGYGGSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSPAGGPTAGGPASGP 289


>07_01_0446 - 3371829-3372132,3374691-3375673
          Length = 428

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 52  NFYSMCMAVKLEIPSVVTLMEFRLDSAEYCQAQHK 156
           NF++ C+ +  E+P+VV   ++RL       A H+
Sbjct: 101 NFHAGCLRLAAELPAVVLSFDYRLAPEHRLPAAHE 135


>07_01_0445 - 3365244-3366227
          Length = 327

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 28  GCSRLPPFNFYSMCMAVKLEIPSVVTLMEFRL 123
           G  R P  NF++ C+ +  E+P+VV   ++RL
Sbjct: 90  GSGRWP--NFHAWCLRLAAELPAVVLSFDYRL 119


>03_06_0337 +
           33224333-33224479,33224603-33224663,33224740-33224776,
           33225237-33225367,33225447-33225590,33225686-33225776,
           33225973-33226106,33226234-33226373,33227328-33227426,
           33227520-33227602,33227690-33227744,33227826-33227937,
           33228274-33228766,33228881-33229094,33229203-33229273,
           33229733-33229901,33229991-33230120,33230556-33230968,
           33231059-33231262
          Length = 975

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 117 PLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVA 227
           PLG +    G    NR+ F +G  R++      LP A
Sbjct: 814 PLGDQSATDGPDANNRRAFNKGNKRKSHDRSSKLPYA 850


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,792,962
Number of Sequences: 37544
Number of extensions: 513633
Number of successful extensions: 1673
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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