BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0557 (746 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 31 1.3 09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 30 1.7 07_01_0532 - 3935661-3935720,3936314-3936412,3937804-3937908,393... 30 2.2 01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311 29 3.0 10_01_0071 - 905696-909028 29 3.9 07_01_0683 - 5145539-5145601,5146113-5146146,5146549-5146650,514... 29 5.2 06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 29 5.2 06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 29 5.2 04_04_0055 + 22403608-22403865,22403977-22404075,22404172-224042... 29 5.2 03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612... 28 6.9 03_02_0830 + 11611588-11611660,11611720-11611952 28 6.9 08_02_1019 - 23657175-23658047 28 9.1 07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 28 9.1 07_01_0975 + 8223269-8224354 28 9.1 07_01_0446 - 3371829-3372132,3374691-3375673 28 9.1 07_01_0445 - 3365244-3366227 28 9.1 03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 28 9.1 >02_05_1074 - 33904518-33904697,33904886-33904985,33905085-33905311, 33905511-33908384,33908467-33908643,33908786-33909008, 33909727-33909806,33910657-33910817,33910892-33910937, 33911129-33911251,33911730-33911804,33911920-33912120 Length = 1488 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 259 WKVRE-VRLVTAATGSMGPADGALLLSPSRKHFL 161 W R VR V A + S+GP D + L P KHFL Sbjct: 839 WVKRSAVRFVVACSESIGPVDTFVYLFPHLKHFL 872 >09_02_0569 - 10752756-10753164,10753229-10753644,10754149-10755349, 10756770-10756991,10757615-10757767,10757883-10758034, 10758142-10758222,10758353-10758598,10759394-10759516 Length = 1000 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -3 Query: 546 TIEQTNCHSISTHTRQSRSFCFERVQLYNGN 454 T++ CHSI T T ++ C E V LYN N Sbjct: 891 TVDIIGCHSIKTLTWINQLPCLEEVYLYNCN 921 >07_01_0532 - 3935661-3935720,3936314-3936412,3937804-3937908, 3939474-3939666,3940434-3940513,3940607-3940904, 3941139-3941431 Length = 375 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%) Frame = +3 Query: 216 LPVAAVTRRTSRTFH-IPTHHQ 278 +P+A V R+TSR H +PT HQ Sbjct: 277 MPIATVNRKTSRAIHSVPTWHQ 298 >01_07_0286 - 42519269-42519754,42524657-42525253,42525277-42526311 Length = 705 Score = 29.5 bits (63), Expect = 3.0 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -2 Query: 745 MDTSDGRSVMRKRIPLYSMREGAGLMSFCFMVTAASLLLGEIEAGSGSHFRTR 587 +DT+DG + ++++PL R G G F AAS LG G+ H R R Sbjct: 381 LDTNDG-TCTKQQLPLRYGRAGGGYTMFVKTGGAASPALGGGGGGNHHHHRLR 432 >10_01_0071 - 905696-909028 Length = 1110 Score = 29.1 bits (62), Expect = 3.9 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Frame = -1 Query: 668 VLLLHGHRCFSSAGRDRSR--LGQSLPHSAGVTSLH-NRLT---VPSQSNRQTVTLFPHT 507 +LL R F +G + S G SLP + V L NR T PS S +T + Sbjct: 157 MLLASNIRSFDVSGNNMSGDISGVSLPATLAVLDLSGNRFTGAIPPSLSGCAGLTTLNLS 216 Query: 506 HDSLVAFVLKGSNYIMGTARIDVVFNH 426 ++ L + +G I G +DV +NH Sbjct: 217 YNGLAGAIPEGIGAIAGLEVLDVSWNH 243 >07_01_0683 - 5145539-5145601,5146113-5146146,5146549-5146650, 5147398-5147658,5148729-5148832,5148999-5149246, 5149360-5149420,5149507-5149682,5149787-5149844, 5150804-5150908,5150995-5151228 Length = 481 Score = 28.7 bits (61), Expect = 5.2 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Frame = -1 Query: 698 VLDEGRRRS--NVLLLHGHRCFS--SAGRDRSRLGQSLPHSAGVTSLHNRLTVPS 546 VL G RR N L+H HR +AG S + + +P+ G +HNRL++PS Sbjct: 369 VLGVGGRRMMINGGLVHSHRSLEDFNAGDAFSSMKRRVPN--GPDPIHNRLSIPS 421 >06_03_0487 - 21352955-21353080,21353164-21353357,21353815-21353973, 21354117-21354242,21354502-21354704,21354892-21355019, 21355323-21355565,21356734-21356928 Length = 457 Score = 28.7 bits (61), Expect = 5.2 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Frame = -2 Query: 271 WVG--MWK--VREVRLVTAATGSMGPADGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPS 107 W G +WK +V + A+ GS G G L +CVEP +P G+P Sbjct: 297 WTGPEIWKDTAGKVDVFVASVGSGGTLTGVGRYLKMKNPSINIVCVEPSESPVISGGSPG 356 Query: 106 MSPQKGSPA 80 +G+ A Sbjct: 357 PHKIQGTGA 365 >06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971, 2574129-2574254,2574522-2574680,2574857-2575050, 2575251-2575376 Length = 339 Score = 28.7 bits (61), Expect = 5.2 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%) Frame = -2 Query: 271 WVG--MWK--VREVRLVTAATGSMGPADGA-LLLSPSRKHFLFICVEPGSTPRCPSGTPS 107 W G +WK +V + A +G+ G G L ICVEP +P G PS Sbjct: 179 WTGPEIWKDTAGKVDIFVAGSGTGGTISGVGKYLKMKNPAVKVICVEPAESPVISGGKPS 238 Query: 106 MSPQKG-SPASQPYTLN 59 +G P P L+ Sbjct: 239 RHKIQGMGPGFVPKNLD 255 >04_04_0055 + 22403608-22403865,22403977-22404075,22404172-22404213, 22404350-22404479,22405118-22405219,22405960-22406066 Length = 245 Score = 28.7 bits (61), Expect = 5.2 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -1 Query: 722 GDEEAHPLVLDEGRRRSNVLLLHGHR 645 G+E A P EG RR L LHG R Sbjct: 6 GEEGARPAAAAEGARRPRFLCLHGFR 31 >03_05_0435 - 24259864-24260206,24260302-24260467,24261175-24261241, 24261553-24261648,24261718-24261898,24262252-24262323, 24262393-24262505,24262596-24262817,24263262-24263910, 24264118-24264206,24265932-24266015,24266219-24266358, 24266522-24266573 Length = 757 Score = 28.3 bits (60), Expect = 6.9 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -1 Query: 584 GVTSLHNRLTVPSQSNRQTVTLFP-HTHDSLVAFVLKGSNYIMGTARIDVVFN 429 GV S N T PS +R+ LFP S + + S+++ R DV+ + Sbjct: 627 GVRSTENLFTTPSMDSRRAFALFPSECPKSSLTSSTRTSSHLHSPTRTDVLLS 679 >03_02_0830 + 11611588-11611660,11611720-11611952 Length = 101 Score = 28.3 bits (60), Expect = 6.9 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = -1 Query: 278 LMMGRYVESARGASSHR---RYRQHGSSGWRSPALAFTETLPVYLC 150 L+ GRY+ ++ AS H R R G+ PA++ LP++LC Sbjct: 3 LLWGRYMCTSALASCHTDPMRARSTGALITEQPAVSLISNLPLHLC 48 >08_02_1019 - 23657175-23658047 Length = 290 Score = 27.9 bits (59), Expect = 9.1 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +3 Query: 171 FREGESRRAPSAGPMLPVAAVTRRTSRTFHIPTHHQL-P*IRSPAAVEHSQQ 323 F ES GP P +AV+ + HHQ P R+PA H QQ Sbjct: 108 FHRKESESPTGVGPAEP-SAVSPAAISAYGASPHHQFSPYYRTPAGYLHHQQ 158 >07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 Length = 2033 Score = 27.9 bits (59), Expect = 9.1 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 658 FMVTAASLLLGEIEAGSGSHF 596 F + S+++G+I AG GSHF Sbjct: 460 FSIRRRSIIVGQITAGDGSHF 480 >07_01_0975 + 8223269-8224354 Length = 361 Score = 27.9 bits (59), Expect = 9.1 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -2 Query: 232 TAATGSMGPADGALLLSPSRKHFLFICVEPGSTPR-CPSGTPSMSPQKGSPASQP 71 T GS G + SPS P +P P+G+P+ P G PAS P Sbjct: 235 TGYGGSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSPAGGPTAGGPASGP 289 >07_01_0446 - 3371829-3372132,3374691-3375673 Length = 428 Score = 27.9 bits (59), Expect = 9.1 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = +1 Query: 52 NFYSMCMAVKLEIPSVVTLMEFRLDSAEYCQAQHK 156 NF++ C+ + E+P+VV ++RL A H+ Sbjct: 101 NFHAGCLRLAAELPAVVLSFDYRLAPEHRLPAAHE 135 >07_01_0445 - 3365244-3366227 Length = 327 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 28 GCSRLPPFNFYSMCMAVKLEIPSVVTLMEFRL 123 G R P NF++ C+ + E+P+VV ++RL Sbjct: 90 GSGRWP--NFHAWCLRLAAELPAVVLSFDYRL 119 >03_06_0337 + 33224333-33224479,33224603-33224663,33224740-33224776, 33225237-33225367,33225447-33225590,33225686-33225776, 33225973-33226106,33226234-33226373,33227328-33227426, 33227520-33227602,33227690-33227744,33227826-33227937, 33228274-33228766,33228881-33229094,33229203-33229273, 33229733-33229901,33229991-33230120,33230556-33230968, 33231059-33231262 Length = 975 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +3 Query: 117 PLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVA 227 PLG + G NR+ F +G R++ LP A Sbjct: 814 PLGDQSATDGPDANNRRAFNKGNKRKSHDRSSKLPYA 850 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,792,962 Number of Sequences: 37544 Number of extensions: 513633 Number of successful extensions: 1673 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1587 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1672 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1980691104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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