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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0557
         (746 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38013| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.25 
SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.33 
SB_46216| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.57 
SB_29592| Best HMM Match : DUF1528 (HMM E-Value=6.8)                   30   1.7  
SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)                29   3.0  
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)           29   5.3  
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30)                   28   7.0  
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.0  
SB_57006| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  
SB_58636| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  
SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23)                    28   9.2  
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)               28   9.2  

>SB_38013| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 88

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +3

Query: 675 PAPSLIEYKGMRFLITDRPSDVSI 746
           P   ++EYK M+FLITDRP++ ++
Sbjct: 14  PGAVMLEYKSMKFLITDRPTNSTL 37


>SB_52311| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 506

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 569 HNRLTVPSQSNRQTVTLFPHTHDSLVAFVLKGSNYIMGTARIDVVFNHSNASESDQ 402
           HN +T+PSQ +R T+T+    H + +A     S Y   T  I   ++H+  +   Q
Sbjct: 252 HNTITIPSQYHRNTITIQSQYHHNTIAI---PSQYHHNTIAIPSQYHHNTITIPSQ 304



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = -1

Query: 569 HNRLTVPSQSNRQTVTLFPHTHDSLVAFVLKGSNYIMGTARIDVVFNHSNASESDQ 402
           HN +T+PS+  + T+T+    H + +      S Y   T  I   ++H+  +   Q
Sbjct: 94  HNTITIPSRHQQNTITIPSQYHHNTITM---PSQYHRNTIAIPSQYHHNTITTPTQ 146



 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 569 HNRLTVPSQSNRQTVTLFPHTHDSLVAFVLKGSNYIMGTARIDVVFNH 426
           HN + +PSQ +  T+T+    H + +A     S Y   T  I   ++H
Sbjct: 285 HNTIAIPSQYHHNTITIPSQYHHNTIAI---PSQYHRNTIAIPSQYHH 329



 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 569 HNRLTVPSQSNRQTVTLFPHTH 504
           HN +T+PSQ N  T+T+    H
Sbjct: 384 HNTITIPSQYNHNTITIPSQYH 405


>SB_46216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 136

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 454 LPALMSFSTTRTHPKAIKQKFRMWKQIKLNHSE 356
           LP  M   T +T PK + Q FR +KQ++  H +
Sbjct: 40  LPPNMRLQTPKTGPKGVIQDFRRYKQLETEHKK 72


>SB_29592| Best HMM Match : DUF1528 (HMM E-Value=6.8)
          Length = 129

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 713 EAHPLVLDEGRRRSNVLLLHGHRCFSSAGRDRSRLGQSLPHSAGVTSLHNR 561
           +AH  + +   R+++ L+  GH     AG  R  LG   P  AG T L+ +
Sbjct: 65  KAHEKIANPRFRKASQLIELGHEKPREAGETRRYLGYEKPRGAGKTRLYRK 115


>SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)
          Length = 333

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = -2

Query: 190 LLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSP 83
           L++P  K+F++ CV PG++ R P+  PS++    +P
Sbjct: 207 LVAPITKYFIYGCVTPGAS-RTPTLVPSINGGNTTP 241


>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 7645

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -1

Query: 557  TVPSQSNRQTVTLFPHTHDSLVAFVLKGSNYIMGTARIDVVFNHSNASESDQT 399
            TV ++ +  TVT+     D+++ FVL+    I G  ++DV    +  + S QT
Sbjct: 1056 TVITEPDTATVTILDD--DAVIGFVLESITVIEGAGKVDVEVKRTGNTGSPQT 1106


>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
          Length = 671

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 151 VEPGSTPRCPSGTPSMSPQKGSPASQPYT 65
           + P S P  PS +P+ +   GSP  QP++
Sbjct: 77  LNPTSDPEIPSSSPNDNHLPGSPGEQPFS 105


>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6863

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 614  RLGQSLPHSAGVTSLHNRL 558
            +L  SL H  G++SLHNRL
Sbjct: 3953 KLSNSLDHDGGLSSLHNRL 3971


>SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30)
          Length = 634

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -1

Query: 335 SATELLAVLNSSGAPNLR*LMMGRYVESARGASSHRRYRQH 213
           +A  LL  +N++  PNL+   + ++ ++ R    H R++QH
Sbjct: 62  TAPALLDAMNAAKIPNLQITTVTQHQQNQRHHQQHHRHQQH 102


>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1741

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -2

Query: 238 LVTAATGSMGPADGALLLSPSRKHFLFICVEPGSTPRCPSG 116
           LV A T ++ PAD +L+ SPSR      CV    T  C +G
Sbjct: 751 LVFAWTYNVNPADASLIASPSRS-----CVHGNVTLTCTAG 786


>SB_57006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 180 GESRRAPSAGPMLPVAAVTRRTSRTFHIPTH 272
           G   R+PS   + P+ A+ +R S  FH+  H
Sbjct: 481 GRKSRSPSILVVRPINAIRKRASSVFHLHDH 511


>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1468

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +3

Query: 72  GCEAGDPFCGDIDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSR 251
           GCE+G   CG  DG+ +   GV          CFR+    + P+  P  P     R+T R
Sbjct: 493 GCESGLT-CGK-DGMVIAWDGV---------GCFRDLRPSKTPTTEPQRPETTTKRKTQR 541

Query: 252 TF 257
            F
Sbjct: 542 RF 543


>SB_58636| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 103

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -1

Query: 650 HRCFSSAGRDRSRLGQSLPHS-AG----VTSLHNRLTVPSQSNRQTVTLFPHTHDSLVA 489
           HR  ++  R   RL  SL H+ AG    VTSLH  ++   ++     +L  HTH +L A
Sbjct: 29  HRSVTATHRKEKRL-TSLTHTHAGRSHAVTSLHRSVSATHRNEELLPSLTIHTHRTLTA 86


>SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23)
          Length = 417

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 180 GESRRAPSAGPMLPVAAVTRRTSRTFHIPTH 272
           G   R+PS   + P+ A+ +R S  FH+  H
Sbjct: 294 GRKSRSPSILVVRPINAIRKRASSVFHLHDH 324


>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
          Length = 851

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 105 IDGVPLGQRGVLPGSTQINRKCFREGESRRAPSAGPMLPVAAVTRRTSRTFHIPT 269
           ++ +  G   V   +T++++   + G  RR PSAG  +      RR+ R    PT
Sbjct: 494 VERILCGGTKVKLNATELSKTSIKSGGRRRTPSAGKRVRKRHSIRRSRRNTTSPT 548


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,358,898
Number of Sequences: 59808
Number of extensions: 567917
Number of successful extensions: 1633
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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