Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0555
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.83 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 545 FVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLP 664
           + LLP L+     +ET     +VR + ++SLR + +QH P
Sbjct: 89  YCLLPPLESLATVEET-----VVRDKAVESLRAVAQQHSP 123


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 544 SFLFTFIVMYNSSCSLLPSRMLYTHCKLNCSF 449
           +F    +V +N SC  +P  +  + CK++ ++
Sbjct: 103 TFQTNVVVKHNGSCLYVPPGIFKSTCKMDITW 134


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 544 SFLFTFIVMYNSSCSLLPSRMLYTHCKLNCSF 449
           +F    +V +N SC  +P  +  + CK++ ++
Sbjct: 103 TFQTNVVVKHNGSCLYVPPGIFKSTCKIDITW 134


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 489 EGKSEQEELYMTIKVKRKDLCSSPI*SGTVLPKRHCIYWLLSDKET 626
           E   EQ+ELYM  +V  K + +    +G    KR  ++ +L+   T
Sbjct: 318 ERSHEQQELYMAAQVIEKSVANFTA-AGFFDVKRSTLFGILATTTT 362


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 305 ETLEVSVNIVLEKRFQLVS 249
           ET  V  NI+L +RF L++
Sbjct: 469 ETQFVVANIILRRRFALIN 487


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 312 KAGNTRS-FRKYRSRKTFSAGFFGEITLFT*VIFLESIF 199
           ++G  R+ FR   S   ++   FG  T+F  ++F E ++
Sbjct: 70  RSGKGRTTFRWLSSTSIYAYFIFGAETIFVTMVFKERLY 108


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 149 TQAVFLLVLLFNIF 108
           TQA+FL+ + +NI+
Sbjct: 185 TQAIFLMFVSYNIY 198


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 149 TQAVFLLVLLFNIF 108
           TQA+FL+ + +NI+
Sbjct: 111 TQAIFLMFVSYNIY 124


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 312 KAGNTRS-FRKYRSRKTFSAGFFGEITLFT*VIFLESIF 199
           ++G  R+ FR   S   ++   FG  T+F  ++F E ++
Sbjct: 70  RSGKGRTTFRWLSSTSIYAYFIFGAETIFVTMVFKERLY 108


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 236 PSSLRSFSLKAFFSNRISATPLLSLNFPTT 147
           P+S+ SF+L+   S   S+ P+LS    TT
Sbjct: 221 PASIDSFTLEQHRSWCSSSQPVLSTTNSTT 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,488
Number of Sequences: 336
Number of extensions: 4031
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)