Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0555
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-li...    87   9e-18
AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical ...    87   9e-18
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe...    29   4.5  
Z47067-2|CAA87329.1|  498|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>AY079166-1|AAL86013.1|  311|Caenorhabditis elegans heat shock-like
           protein protein.
          Length = 311

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 38/87 (43%), Positives = 59/87 (67%)
 Frame = +3

Query: 255 QLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLT 434
           QL+    NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T
Sbjct: 77  QLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVT 136

Query: 435 LPHLEKEQFNLQWVYNILEGKSEQEEL 515
            P++EK Q NL WVYN LE +SE +++
Sbjct: 137 RPYIEKYQLNLNWVYNCLEKRSEVDKI 163



 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +2

Query: 509 RIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLPLLKRIRDE 688
           +IV ++   + GFVLL D+KWDG T E LY+LAI  +  +KS+RDL    L +L  +RD+
Sbjct: 162 KIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGLKSVRDLTGDDLEMLYNMRDK 221

Query: 689 GKKTILEK 712
             + I +K
Sbjct: 222 SLEAINQK 229


>AL132858-5|CAB60481.1|  311|Caenorhabditis elegans Hypothetical
           protein Y113G7A.9 protein.
          Length = 311

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 38/87 (43%), Positives = 59/87 (67%)
 Frame = +3

Query: 255 QLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLT 434
           QL+    NDI+G++       +N +K+ +IYP  D+ IAK+ Q+E  ++ ETPELY+ +T
Sbjct: 77  QLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDRLIAKYRQEEKFVIRETPELYETVT 136

Query: 435 LPHLEKEQFNLQWVYNILEGKSEQEEL 515
            P++EK Q NL WVYN LE +SE +++
Sbjct: 137 RPYIEKYQLNLNWVYNCLEKRSEVDKI 163



 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +2

Query: 509 RIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLPLLKRIRDE 688
           +IV ++   + GFVLL D+KWDG T E LY+LAI  +  +KS+RDL    L +L  +RD+
Sbjct: 162 KIVFEDPDNENGFVLLQDIKWDGKTLENLYVLAICHRHGLKSVRDLTGDDLEMLYNMRDK 221

Query: 689 GKKTILEK 712
             + I +K
Sbjct: 222 SLEAINQK 229


>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
           defective protein 45 protein.
          Length = 1076

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 551 LLPDLKWDGLTKETLYLL-AIVRQRDIKSLRDLDEQHLPLLKRIRDEGKKTILEKI 715
           L  DLK   L K+ L+   A+ +Q ++KSL  +    L L ++  ++ +K  +EK+
Sbjct: 58  LCVDLKKQHLAKDALFQYKALTQQINVKSLETVVVHFLKLAEQRTEDAQKQSIEKV 113


>Z47067-2|CAA87329.1|  498|Caenorhabditis elegans Hypothetical
           protein C43C3.2 protein.
          Length = 498

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -1

Query: 571 PLQIGEEHKSFLFTFI-VMYNSSCSLLPSRMLYTHCKLN 458
           PLQ+   ++  +F F+ +M+  +C +L   +LY H K++
Sbjct: 160 PLQVRVRNQRTVFVFLGIMFFVTCVMLSPILLYAHSKVH 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,902,592
Number of Sequences: 27780
Number of extensions: 374471
Number of successful extensions: 962
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)