Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0554
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 115 5e-26
07_01_0578 + 4295386-4296489,4297394-4297507 112 3e-25
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.19
10_02_0199 + 6668902-6669293,6669825-6669882 33 0.25
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.25
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.44
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 2.3
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 30 2.3
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 3.1
12_02_0711 + 22404710-22404824,22405726-22406288,22406386-224065... 29 4.1
12_02_0709 - 22359705-22360292,22360396-22360560,22360650-223611... 29 4.1
03_01_0092 - 731069-731434,731569-733080 29 4.1
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 29 4.1
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 5.4
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 5.4
05_03_0163 + 9070781-9071320 29 5.4
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 29 5.4
10_07_0029 + 12031711-12032464,12044289-12044386 28 7.1
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 28 7.1
07_01_0469 - 3552409-3553368 28 9.4
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 28 9.4
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 9.4
05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 9.4
04_01_0244 - 3194141-3195091,3195301-3195312 28 9.4
03_01_0147 - 1170481-1171260,1171332-1171511 28 9.4
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 115 bits (276), Expect = 5e-26
Identities = 53/87 (60%), Positives = 56/87 (64%)
Frame = +1
Query: 256 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 435
ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 68 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAV 127
Query: 436 XXXXXXXXXXXXXQARGHIIEKIPGFP 516
ARGH IE +P FP
Sbjct: 128 ASALAATAVPSLVLARGHRIEGVPEFP 154
Score = 88.2 bits (209), Expect = 6e-18
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +3
Query: 513 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 692
PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKGPLI+
Sbjct: 154 PLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIV 213
Query: 693 FNKD-QGLTRAFRNIPGVELLNV 758
+ + + +AFRN+PGV++ NV
Sbjct: 214 YGTEGSKVVKAFRNLPGVDVANV 236
Score = 64.9 bits (151), Expect = 7e-11
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 241
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 242 HQTSA 256
HQTSA
Sbjct: 63 HQTSA 67
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 112 bits (270), Expect = 3e-25
Identities = 51/87 (58%), Positives = 55/87 (63%)
Frame = +1
Query: 256 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 435
ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAV 128
Query: 436 XXXXXXXXXXXXXQARGHIIEKIPGFP 516
ARGH IE +P P
Sbjct: 129 ASALAATSVPSLVLARGHRIETVPELP 155
Score = 87.8 bits (208), Expect = 8e-18
Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 689
LPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKGPLI
Sbjct: 154 LPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLI 213
Query: 690 IFNKD-QGLTRAFRNIPGVELLNV 758
++ + + +AFRN+PGV++ NV
Sbjct: 214 VYGTEGSKIVKAFRNLPGVDVANV 237
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 74 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 247
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 248 TSA 256
TSA
Sbjct: 66 TSA 68
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 359 PPRHMLPKAP*PDLWVPPP 303
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +1
Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 363
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 525 LQPREAGNLFNNVSSSLNERWDASSSNGCCQGRS 424
++PRE G+ V S+ NE WD + ++G G +
Sbjct: 673 VEPRERGDNEQRVVSAYNEAWDVAGADGRAGGEA 706
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>12_02_0711 +
22404710-22404824,22405726-22406288,22406386-22406547,
22406664-22407257
Length = 477
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 169 PGQ*CSRFYVQELEAALLREQGGWSPNQCESWGT 270
P + C RF + + L ++G ++ +C WGT
Sbjct: 305 PPEECGRFLLLSIGTGLASDEGLYTAEKCSRWGT 338
>12_02_0709 - 22359705-22360292,22360396-22360560,22360650-22361157,
22361159-22361577,22362261-22362722,22362853-22364415
Length = 1234
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 160 TSGPGQ*CSRFYVQELEAALLREQGGWSPNQCESWG 267
T P + C RF V + L ++G ++ +C WG
Sbjct: 1062 TKPPEKECGRFLVLSIGTGLTSDEGLYTAEKCSRWG 1097
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 356 PRHMLPKAP*PDLWVPPPRTRGIRATAR--PVPHDSH 252
P H++P P P L P P+++ R P P + H
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAPPPQEQH 303
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +1
Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGT--HRSGQGAF 339
R + GW +Q + + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -3
Query: 695 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 564
ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 340 RRHPDRTYGYHHHGHAEFGQQHVRYPMIR---TGLVTSLLAHAVG 215
R H D +G+HHH H G H P + G +A A+G
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEVHGSGGGAAVMRVAKAIG 111
>05_03_0163 + 9070781-9071320
Length = 179
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQG 333
R GGWS + E WG G ++ GGG RS +G
Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 208 EAALLREQGGWSPNQCESWGTGRAV 282
EAALLR G W+ + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 364 YVHHDTCYRRHPDRTYG 314
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +1
Query: 199 QELEAALLREQGGWSPNQCESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 363
+++ A ++GG S ++ + G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 364 MFAPTKP-WR 390
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 364 YVHHDTCYRRHPDRTYG 314
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = +2
Query: 59 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 238
S + PL + S KS + ++ LP V P + +HV K S P C S+
Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556
Query: 239 GHQTSANHGVP 271
+ H P
Sbjct: 557 AKLVADGHARP 567
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQGAFG 342
+ GGW+ ++CE G + + GG +++ QG G
Sbjct: 1561 KPDGGWNSSKCEGTQGGGGGSSWDKADGGNSNKGTQGGGG 1600
>05_05_0285 -
23855219-23855371,23855391-23856063,23856239-23856301,
23856478-23856604,23856751-23856897,23856968-23856974,
23857203-23857379
Length = 448
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 384 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 476
+A AP AESG+G+ C +WR S S
Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 364 YVHHDTCYRRHPDRTYG 314
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 31 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,170,446
Number of Sequences: 37544
Number of extensions: 528576
Number of successful extensions: 2026
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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