BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0554 (769 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 115 5e-26 07_01_0578 + 4295386-4296489,4297394-4297507 112 3e-25 06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.19 10_02_0199 + 6668902-6669293,6669825-6669882 33 0.25 07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.25 12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.44 11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 2.3 06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 30 2.3 08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 3.1 12_02_0711 + 22404710-22404824,22405726-22406288,22406386-224065... 29 4.1 12_02_0709 - 22359705-22360292,22360396-22360560,22360650-223611... 29 4.1 03_01_0092 - 731069-731434,731569-733080 29 4.1 02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 29 4.1 11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 5.4 06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 5.4 05_03_0163 + 9070781-9071320 29 5.4 03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 29 5.4 10_07_0029 + 12031711-12032464,12044289-12044386 28 7.1 07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 28 7.1 07_01_0469 - 3552409-3553368 28 9.4 05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 28 9.4 05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 9.4 05_05_0285 - 23855219-23855371,23855391-23856063,23856239-238563... 28 9.4 04_01_0244 - 3194141-3195091,3195301-3195312 28 9.4 03_01_0147 - 1170481-1171260,1171332-1171511 28 9.4 >03_06_0298 - 32925441-32925998,32926371-32926730,32927161-32927230, 32927642-32927797,32929181-32929242,32929339-32929352, 32930421-32930520,32931474-32932574 Length = 806 Score = 115 bits (276), Expect = 5e-26 Identities = 53/87 (60%), Positives = 56/87 (64%) Frame = +1 Query: 256 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 435 ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH Sbjct: 68 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAV 127 Query: 436 XXXXXXXXXXXXXQARGHIIEKIPGFP 516 ARGH IE +P FP Sbjct: 128 ASALAATAVPSLVLARGHRIEGVPEFP 154 Score = 88.2 bits (209), Expect = 6e-18 Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%) Frame = +3 Query: 513 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 692 PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRNRR I RKGPLI+ Sbjct: 154 PLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIV 213 Query: 693 FNKD-QGLTRAFRNIPGVELLNV 758 + + + +AFRN+PGV++ NV Sbjct: 214 YGTEGSKVVKAFRNLPGVDVANV 236 Score = 64.9 bits (151), Expect = 7e-11 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = +2 Query: 65 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 241 + ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62 Query: 242 HQTSA 256 HQTSA Sbjct: 63 HQTSA 67 >07_01_0578 + 4295386-4296489,4297394-4297507 Length = 405 Score = 112 bits (270), Expect = 3e-25 Identities = 51/87 (58%), Positives = 55/87 (63%) Frame = +1 Query: 256 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 435 ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH Sbjct: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAV 128 Query: 436 XXXXXXXXXXXXXQARGHIIEKIPGFP 516 ARGH IE +P P Sbjct: 129 ASALAATSVPSLVLARGHRIETVPELP 155 Score = 87.8 bits (208), Expect = 8e-18 Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 1/84 (1%) Frame = +3 Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 689 LPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRNRR I RKGPLI Sbjct: 154 LPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRNRRYINRKGPLI 213 Query: 690 IFNKD-QGLTRAFRNIPGVELLNV 758 ++ + + +AFRN+PGV++ NV Sbjct: 214 VYGTEGSKIVKAFRNLPGVDVANV 237 Score = 62.9 bits (146), Expect = 3e-10 Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%) Frame = +2 Query: 74 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 247 RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65 Query: 248 TSA 256 TSA Sbjct: 66 TSA 68 >06_02_0298 + 13921310-13921834,13921923-13922063,13923601-13923951, 13924071-13924130,13924261-13924380,13924569-13924718 Length = 448 Score = 33.5 bits (73), Expect = 0.19 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 Query: 359 PPRHMLPKAP*PDLWVPPP 303 PPRH++P+ P P WVPPP Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325 >10_02_0199 + 6668902-6669293,6669825-6669882 Length = 149 Score = 33.1 bits (72), Expect = 0.25 Identities = 20/47 (42%), Positives = 23/47 (48%) Frame = +1 Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 363 RE GG + +SW TGRA A + R R GG R A N G R Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72 >07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 Length = 292 Score = 33.1 bits (72), Expect = 0.25 Identities = 20/52 (38%), Positives = 23/52 (44%) Frame = +1 Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192 ASL N + P+F V G SQA V + GAHT G Q C F Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175 >12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-614845 Length = 291 Score = 32.3 bits (70), Expect = 0.44 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +1 Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192 ASL N I +PTF +G + G S + + GAHT G + C F Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176 >11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-571872 Length = 291 Score = 29.9 bits (64), Expect = 2.3 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192 ASL N I +PT +G + G S + + GAHT G + C F Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176 >06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-153531, 153585-154211,154300-154638,154740-154991,155083-155556 Length = 732 Score = 29.9 bits (64), Expect = 2.3 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -2 Query: 525 LQPREAGNLFNNVSSSLNERWDASSSNGCCQGRS 424 ++PRE G+ V S+ NE WD + ++G G + Sbjct: 673 VEPRERGDNEQRVVSAYNEAWDVAGADGRAGGEA 706 >08_02_0105 + 12448808-12449152,12449218-12449409,12449520-12449685, 12449771-12450201 Length = 377 Score = 29.5 bits (63), Expect = 3.1 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 37 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192 ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247 >12_02_0711 + 22404710-22404824,22405726-22406288,22406386-22406547, 22406664-22407257 Length = 477 Score = 29.1 bits (62), Expect = 4.1 Identities = 10/34 (29%), Positives = 18/34 (52%) Frame = +1 Query: 169 PGQ*CSRFYVQELEAALLREQGGWSPNQCESWGT 270 P + C RF + + L ++G ++ +C WGT Sbjct: 305 PPEECGRFLLLSIGTGLASDEGLYTAEKCSRWGT 338 >12_02_0709 - 22359705-22360292,22360396-22360560,22360650-22361157, 22361159-22361577,22362261-22362722,22362853-22364415 Length = 1234 Score = 29.1 bits (62), Expect = 4.1 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = +1 Query: 160 TSGPGQ*CSRFYVQELEAALLREQGGWSPNQCESWG 267 T P + C RF V + L ++G ++ +C WG Sbjct: 1062 TKPPEKECGRFLVLSIGTGLTSDEGLYTAEKCSRWG 1097 >03_01_0092 - 731069-731434,731569-733080 Length = 625 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = -3 Query: 356 PRHMLPKAP*PDLWVPPPRTRGIRATAR--PVPHDSH 252 P H++P P P L P P+++ R P P + H Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAPPPQEQH 303 >02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452, 26643948-26644120,26644227-26644308,26644623-26644758, 26644777-26644833,26644905-26645120,26645939-26646335, 26646458-26646544,26647063-26647324,26648892-26648972, 26649176-26650350 Length = 1221 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +1 Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGT--HRSGQGAF 339 R + GW +Q + + + R P +GGG R GQG F Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161 >11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 Length = 472 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%) Frame = -3 Query: 695 EDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 564 ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D Sbjct: 236 EDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281 >06_03_1205 - 28406183-28406218,28406462-28406548,28406769-28406830, 28407968-28408184,28408793-28408957,28409145-28409250, 28409830-28410071,28410493-28410605,28410848-28411043, 28411681-28411827,28412034-28412218,28412478-28412592, 28413237-28413728 Length = 720 Score = 28.7 bits (61), Expect = 5.4 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = -1 Query: 340 RRHPDRTYGYHHHGHAEFGQQHVRYPMIR---TGLVTSLLAHAVG 215 R H D +G+HHH H G H P + G +A A+G Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEVHGSGGGAAVMRVAKAIG 111 >05_03_0163 + 9070781-9071320 Length = 179 Score = 28.7 bits (61), Expect = 5.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQG 333 R GGWS + E WG G ++ GGG RS +G Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50 >03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-969434 Length = 477 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 208 EAALLREQGGWSPNQCESWGTGRAV 282 EAALLR G W+ + WG G V Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391 >10_07_0029 + 12031711-12032464,12044289-12044386 Length = 283 Score = 28.3 bits (60), Expect = 7.1 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 364 YVHHDTCYRRHPDRTYG 314 Y+ HDT YR HP R G Sbjct: 94 YIFHDTAYRYHPRRANG 110 >07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298, 3895929-3896167,3896524-3896610,3896967-3897066, 3897908-3898115,3898224-3899422 Length = 1442 Score = 28.3 bits (60), Expect = 7.1 Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Frame = +1 Query: 199 QELEAALLREQGGWSPNQCESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 363 +++ A ++GG S ++ + G++V + + R+R H G G+ G++ + GG+ Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122 Query: 364 MFAPTKP-WR 390 M P P WR Sbjct: 123 MLRPGFPKWR 132 >07_01_0469 - 3552409-3553368 Length = 319 Score = 27.9 bits (59), Expect = 9.4 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 364 YVHHDTCYRRHPDRTYG 314 Y+ HDT YR HP R G Sbjct: 94 YIFHDTAYRFHPRRASG 110 >05_06_0065 - 25303143-25303769,25303868-25304758,25305096-25305202, 25305518-25305629 Length = 578 Score = 27.9 bits (59), Expect = 9.4 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = +2 Query: 59 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 238 S + PL + S KS + ++ LP V P + +HV K S P C S+ Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556 Query: 239 GHQTSANHGVP 271 + H P Sbjct: 557 AKLVADGHARP 567 >05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572, 24804956-24805114,24805862-24805929,24806044-24806433, 24806515-24806563,24806636-24806788,24807416-24807589, 24808207-24808362,24808705-24808756,24808830-24808988, 24809058-24809094,24809218-24809252,24809349-24809400, 24809614-24809663,24810590-24811924,24812688-24812825, 24812907-24812957,24813081-24814237 Length = 1625 Score = 27.9 bits (59), Expect = 9.4 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +1 Query: 223 REQGGWSPNQCESWGTGRAVARIPRVRGGGTHRSGQGAFG 342 + GGW+ ++CE G + + GG +++ QG G Sbjct: 1561 KPDGGWNSSKCEGTQGGGGGSSWDKADGGNSNKGTQGGGG 1600 >05_05_0285 - 23855219-23855371,23855391-23856063,23856239-23856301, 23856478-23856604,23856751-23856897,23856968-23856974, 23857203-23857379 Length = 448 Score = 27.9 bits (59), Expect = 9.4 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 384 LAALAPSRQPPTAESGLGSSRCCYWRPSARS 476 +A AP AESG+G+ C +WR S S Sbjct: 306 IAKDAPPAVEVKAESGVGTLGCAFWRTSLGS 336 >04_01_0244 - 3194141-3195091,3195301-3195312 Length = 320 Score = 27.9 bits (59), Expect = 9.4 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 364 YVHHDTCYRRHPDRTYG 314 Y+ HDT YR HP R G Sbjct: 98 YIFHDTAYRFHPRRANG 114 >03_01_0147 - 1170481-1171260,1171332-1171511 Length = 319 Score = 27.9 bits (59), Expect = 9.4 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 31 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 192 G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,170,446 Number of Sequences: 37544 Number of extensions: 528576 Number of successful extensions: 2026 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2016 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2063219900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -