Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0553
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   4.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.0  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -2

Query: 417 IHLLQMLFHGFNDNPSVFDILFRKNCEHIY-QWLAVDGQIRQTGRIFLGDFFRHDDGR 247
           I L + +F+G   NP+  DI       H Y  + AV    R+   I +     +DD R
Sbjct: 208 IELYKEIFNGKRKNPNGCDIKATFFVSHKYTNYSAVQEMHRKGHEIAVHSITHNDDER 265


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 147 WLTLQCFIVEQFVLYLTTDVQLMLKVR 227
           WL   C I E   ++L  +V  + K+R
Sbjct: 109 WLHQICHICELHTIFLVCNVLTVFKIR 135


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/44 (15%), Positives = 21/44 (47%)
 Frame = +3

Query: 36  SEWQRLLSITEKVCSALNKITRQIGVLFVYCVSKNVPWLTLQCF 167
           S W+ L     ++C    ++  +I  + +   + ++ ++ +Q F
Sbjct: 264 SAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQLF 307


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/44 (15%), Positives = 21/44 (47%)
 Frame = +3

Query: 36  SEWQRLLSITEKVCSALNKITRQIGVLFVYCVSKNVPWLTLQCF 167
           S W+ L     ++C    ++  +I  + +   + ++ ++ +Q F
Sbjct: 264 SAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQLF 307


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/44 (15%), Positives = 21/44 (47%)
 Frame = +3

Query: 36  SEWQRLLSITEKVCSALNKITRQIGVLFVYCVSKNVPWLTLQCF 167
           S W+ L     ++C    ++  +I  + +   + ++ ++ +Q F
Sbjct: 264 SAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQLF 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,410
Number of Sequences: 336
Number of extensions: 4338
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)