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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0553
         (751 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4G9.04c |||cleavage and polyadenylation specificity factor |...    52   9e-08
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr...    28   1.6  
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po...    26   6.6  
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ...    26   6.6  
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc...    26   6.6  
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    26   6.6  

>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 638

 Score = 52.0 bits (119), Expect = 9e-08
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = +1

Query: 280 EYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEK 411
           +Y S+L DLT NSKP+I+ LT +A+EN  +A  IV  +EKH++K
Sbjct: 7   DYLSALEDLTFNSKPIIHTLTYIAQENEPYAISIVNAIEKHIQK 50


>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 904

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 474 YSERVDNNSSRVYFLLKMEIHLLQMLFHGFNDNPSV 367
           Y+E V +  + +   LK + H + M+  G ND+PS+
Sbjct: 715 YAEAVPSQKAEIIQKLKDQKHCVAMVGDGINDSPSL 750


>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 2812

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
 Frame = -2

Query: 474  YSERVD-NNSSRV-YFLLKMEIHLLQMLFH---GFNDNPSVFDILFRKNCEHIYQWLAVD 310
            ++ RV  NNS+ + +F  K  +     LF    GF+  PSV D++ R+    ++   A D
Sbjct: 1282 FANRVSFNNSTAIPFFSTKSVLWYCNRLFQELEGFSSIPSVIDLVLRRLAIQLH--FATD 1339

Query: 309  GQIRQTGRIFLGDFFRHDDGRPRWHAKHELLASTAHQLLNITRT 178
             +++ T    L  F    D     +    ++   A QLL+I  T
Sbjct: 1340 EELQVTISFRLCAFLCFSDPFITSNYLVMIVLRIARQLLSIPCT 1383


>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 501

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 241 SWAAVIMSKEISEEYASSLADLTVNSKP 324
           +W A+  S  ISE Y SS+++ T++  P
Sbjct: 35  NWLAITHSLPISEWYKSSISEWTLDYPP 62


>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1573

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -2

Query: 252  GRPRWHAKHELLASTAHQLLNITRTVQ 172
            G+P  H++  +L STA++LL +  T +
Sbjct: 1300 GKPIKHSRSPILHSTAYELLGLPHTYE 1326


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T ++IT +  + SS  I S
Sbjct: 2384 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITS 2438



 Score = 25.8 bits (54), Expect = 6.6
 Identities = 23/93 (24%), Positives = 40/93 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVSIFING 321
            +STP T S +VN  T      +       T S   ++ + IT +  + SS  I S  +  
Sbjct: 2492 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVN 2551

Query: 320  LLLTVRSAKLDAYSSEISFDMMTAAHDGMPNTN 222
                + S+ +   S+ I+   +TA +   P T+
Sbjct: 2552 TSTPITSSTVVNSSTPIT--SLTALNSSTPITS 2582



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500 ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
           +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 476 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 530



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 24/92 (26%), Positives = 38/92 (41%)
 Frame = -3

Query: 497  STPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVSIFINGL 318
            STP T S +VN  T      +       T S   +T + IT +  + SS  I S  +   
Sbjct: 837  STPITSSTVVNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 896

Query: 317  LLTVRSAKLDAYSSEISFDMMTAAHDGMPNTN 222
               + S+ +   S+ I+    TA +   P T+
Sbjct: 897  STPITSSTVVNSSTPIT--SSTALNTSTPITS 926



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 884  SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 938



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 1040 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 1094



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 1436 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 1490



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 1556 SSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 1610



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 1664 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 1718



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 1820 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 1874



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2012 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 2066



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2276 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 2330



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT + ++ +S  I S
Sbjct: 2324 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITS 2378



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2588 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 2642



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2660 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 2714



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2684 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 2738



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2888 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 2942



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2912 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS 2966



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 2984 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 3038



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 3008 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITS 3062



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 3248 SSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITS 3302



 Score = 25.4 bits (53), Expect = 8.7
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 500  ASTPTTFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIFSSARIVS 336
            +STP T S +VN  T      +       T S   +T + IT +  + SS  I S
Sbjct: 3272 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAITS 3326


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,290,975
Number of Sequences: 5004
Number of extensions: 73626
Number of successful extensions: 236
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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