Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0553
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    40   0.003
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370...    29   3.9  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    29   3.9  
08_01_0576 - 5114636-5115151,5115254-5116183,5116898-5117614,511...    29   5.2  
05_01_0608 + 5429901-5429982,5430610-5431058,5436758-5437183,543...    28   9.1  
02_05_0712 + 31130650-31130786,31130927-31130980,31131076-311312...    28   9.1  

>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +1

Query: 268 EISEEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETV 393
           E+  +Y ++L +LT NSKP+I  LTI+A EN+  A  I   +
Sbjct: 50  ELVAQYRTALGELTFNSKPIITNLTIIAGENLHAAKPIASLI 91


>05_03_0369 -
           13136146-13136175,13136237-13136908,13136926-13137016,
           13137184-13137416,13137459-13137731,13137877-13138265,
           13138325-13139156,13139847-13139922,13140027-13140414,
           13141395-13141748,13142069-13142333,13143366-13143716
          Length = 1317

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 575 CSCLTGYKRGLTKLNRCHH-SLSHWCASTP 489
           CSCL      L  L +  H +LSH+C  TP
Sbjct: 836 CSCLEWTPDNLVGLTKLQHLNLSHYCTGTP 865


>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
            26699321-26699416
          Length = 1515

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +1

Query: 271  ISEEYASSLADLTVNSKPLINMLTILAEEN---IEHAGVIVETVEKHLEKVNF 420
            +  E AS + D+  N+K L+N + +L+ +     EH  +I E     +EK++F
Sbjct: 1160 VQAETASKINDMETNTKDLVNTIVLLSSQKNKVEEHMKIITEAC---MEKMSF 1209


>08_01_0576 -
           5114636-5115151,5115254-5116183,5116898-5117614,
           5119630-5119746,5119930-5120295,5121365-5121634
          Length = 971

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 283 YASSLADLTVNSKPLINMLTILAEEN 360
           Y   L++LT N KP+I  LTI+A ++
Sbjct: 47  YVEVLSELTFNCKPIITELTIIAGQH 72


>05_01_0608 +
           5429901-5429982,5430610-5431058,5436758-5437183,
           5437270-5437643,5437655-5438113,5438191-5438361,
           5438442-5438760
          Length = 759

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 333 IYQWLAVDGQIRQTGRIFLGDFFRHDDGRPR 241
           IY WLA++  + +    ++    RH DG P+
Sbjct: 680 IYDWLAIEYALNEASDQYVARGGRHKDGHPK 710


>02_05_0712 +
           31130650-31130786,31130927-31130980,31131076-31131249,
           31131425-31131530,31131646-31131687,31131768-31131824,
           31132410-31132850
          Length = 336

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 674 RNYLPYKINLEGNISNRMRGNK 609
           RNY P K +L+G + +R RGN+
Sbjct: 40  RNYPPPKWDLQGGVYDRSRGNR 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,426,006
Number of Sequences: 37544
Number of extensions: 443372
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)