BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0553 (751 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11 SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1) 29 4.0 SB_25618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20) 28 7.0 SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 28 7.0 SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 >SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1283 Score = 65.3 bits (152), Expect = 5e-11 Identities = 31/46 (67%), Positives = 39/46 (84%) Frame = +1 Query: 277 EEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEKV 414 EEYASSLADLT NSKPLIN+LT+LAEEN ++A IV+ +EK ++ V Sbjct: 50 EEYASSLADLTFNSKPLINVLTMLAEENGQYAASIVKLIEKRIQTV 95 >SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1) Length = 208 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = -3 Query: 509 HWCASTPT-TFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIF 357 H C + + T V W+ITL EC+ W T +C + S C F Sbjct: 96 HECVTFRSITLHECVTFWSITLHECVTF--WSITLHECVTFRSITLHECVTF 145 >SB_25618| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 671 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 423 FLTKNTLLKSYCPHVHYIRESGRC*R 500 FLT+ L+KS PH H +R G C R Sbjct: 348 FLTELNLMKSLRPHPHVVRLIGCCTR 373 >SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20) Length = 984 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 423 FLTKNTLLKSYCPHVHYIRESGRC*R 500 FLT+ L+KS PH H +R G C R Sbjct: 351 FLTELNLMKSLRPHPHVVRLIGCCTR 376 >SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) Length = 915 Score = 28.3 bits (60), Expect = 7.0 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +3 Query: 42 WQRLLSITEKVCSALNKITRQIGVLFVYCVSK 137 W+R L ++++ C+ N I + + VYCV K Sbjct: 736 WRRALPLSKEYCACENTIRIYVRFIKVYCVLK 767 >SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 395 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +2 Query: 221 SSCLACHRGRPSSCRKKSPRNMRPVWR 301 ++C AC RG+P C K + VW+ Sbjct: 138 NTCKACRRGQPHFCEKGGTGSAIGVWK 164 >SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 653 Score = 27.9 bits (59), Expect = 9.3 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +3 Query: 315 QQAIDKYAHNSCGREYRT-RWGYR*NRGKAFGEGEFPFLTKNTLLKSYCPH 464 QQ + H S R YR +W + R EF + +++++SY PH Sbjct: 401 QQQQQRVVHTSGTRPYRLDQWSHTLVRDVTCNMCEFDMMPLSSVIQSYLPH 451 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,158,548 Number of Sequences: 59808 Number of extensions: 543492 Number of successful extensions: 1214 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1058 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1211 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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