Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0553
         (751 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)               65   5e-11
SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)                  29   4.0  
SB_25618| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20)                   28   7.0  
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)     28   7.0  
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  

>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1283

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +1

Query: 277 EEYASSLADLTVNSKPLINMLTILAEENIEHAGVIVETVEKHLEKV 414
           EEYASSLADLT NSKPLIN+LT+LAEEN ++A  IV+ +EK ++ V
Sbjct: 50  EEYASSLADLTFNSKPLINVLTMLAEENGQYAASIVKLIEKRIQTV 95


>SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)
          Length = 208

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -3

Query: 509 HWCASTPT-TFSNIVNVWTITLQECIFC*KWKFTFSKCFSTVSTITPACSIF 357
           H C +  + T    V  W+ITL EC+    W  T  +C +  S     C  F
Sbjct: 96  HECVTFRSITLHECVTFWSITLHECVTF--WSITLHECVTFRSITLHECVTF 145


>SB_25618| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 671

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 423 FLTKNTLLKSYCPHVHYIRESGRC*R 500
           FLT+  L+KS  PH H +R  G C R
Sbjct: 348 FLTELNLMKSLRPHPHVVRLIGCCTR 373


>SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20)
          Length = 984

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 423 FLTKNTLLKSYCPHVHYIRESGRC*R 500
           FLT+  L+KS  PH H +R  G C R
Sbjct: 351 FLTELNLMKSLRPHPHVVRLIGCCTR 376


>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
          Length = 915

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 42  WQRLLSITEKVCSALNKITRQIGVLFVYCVSK 137
           W+R L ++++ C+  N I   +  + VYCV K
Sbjct: 736 WRRALPLSKEYCACENTIRIYVRFIKVYCVLK 767


>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 395

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 221 SSCLACHRGRPSSCRKKSPRNMRPVWR 301
           ++C AC RG+P  C K    +   VW+
Sbjct: 138 NTCKACRRGQPHFCEKGGTGSAIGVWK 164


>SB_23302| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 653

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +3

Query: 315 QQAIDKYAHNSCGREYRT-RWGYR*NRGKAFGEGEFPFLTKNTLLKSYCPH 464
           QQ   +  H S  R YR  +W +   R       EF  +  +++++SY PH
Sbjct: 401 QQQQQRVVHTSGTRPYRLDQWSHTLVRDVTCNMCEFDMMPLSSVIQSYLPH 451


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,158,548
Number of Sequences: 59808
Number of extensions: 543492
Number of successful extensions: 1214
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)